Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1508 ATGGATTTGGGCAAGGGAAATGAAGCAGAAAATAGCTGTGTAGAAGAGAGTACAAGCATATTTGATGGAGTTGAAGTTGAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGAAGCTGCCAGAAAATTTTATGTTGACTATGCCAGACAGGTTGGATTTGTAGTACGCATTATGCAACGTCGACGTTCGGGTATTGACGGGAGGACTCTTGCTCGCCGTCTCGGATGTAGCAAACAGGGATTCTCACCTAATAACAAGTTGGGGCCAGAGAAAAGGCCAAGACCAAGTGCACGAGAAGGTTGCAACGCAACAATTTTGGTCAAGTTAGAAAAATCCGGAAAATGGGTTGTCACAAGGTTTATAAAGGATCACAACCATCCTCTAATCACTGCTGCTAATGGGTTCAGCAAAGCAGATGATAAAGATAAGAAAATAGCAGAGCTTATGACGGAGTTAGAGCGCCAGGATCAATTGTGCGCTGAATATCGAGACAAACTACTCAGCTTCATAAAAAACGTCGAGGAGCAAATAGAGGGTCTTTCCACAAAAATTCAACTCATTGTTGAAAATATCAGGAGAGCTGAGTCTGAAATGCAAAAATGTTGTAAGGTCAGAAAACCTGGATACTTAACCATAACTGGTGTATAA 651 0.4178 MDLGKGNEAENSCVEESTSIFDGVEVEEPYVGMEFDSEEAARKFYVDYARQVGFVVRIMQRRRSGIDGRTLARRLGCSKQGFSPNNKLGPEKRPRPSAREGCNATILVKLEKSGKWVVTRFIKDHNHPLITAANGFSKADDKDKKIAELMTELERQDQLCAEYRDKLLSFIKNVEEQIEGLSTKIQLIVENIRRAESEMQKCCKVRKPGYLTITGV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1508 216 Coils Coil 171 198 - -
Lal9g1508 216 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 204 - -
Lal9g1508 216 Coils Coil 139 166 - -
Lal9g1508 216 MobiDBLite consensus disorder prediction 77 100 - -
Lal9g1508 216 Pfam FAR1 DNA-binding domain 43 130 IPR004330 -
Lal9g1508 216 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 2 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1508 Lal-Chr9 17350074 17355876 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal9g1508 FAR1 3.6e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1508 - - vun:114183030 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1508 9 17350074 17355876 Lal19g0067 19 525055 529228 PCT
Lal19g0067 19 525055 529228 Lal9g1508 9 17350074 17355876 PCT