Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1498 ATGAAAAGAAACATCGAATTTGGTCAGAGTCCAGAAAGGGGTAGAGAGAAATCAGAAATGGCACTTAGAGCAGCCATACTCCGCCACGTTCGTGTCCCAATCCAAAGGATTCGTGGTGGTTTTGATGTTTCGCTCCGTTTCATGTCTTCACACGATGATCATATCACAAAGGATGAAGTCATCGATAGAGTCCTCTCTGTTGTCAAAGATTTCCCCAAACTCGATCCTTCCAAGGTGACCCCGGATGTACATTTCCAGAAGGATTTGGGTTTGGATAGCTTGGACAATGTGGAAATTGTTATGGCTCTAGAAGAGGAGTTCAAGCTGGAGATCCCAGACAAGGAAGCTGATAAAATTGACTCTTGTCATCTTGCTATTGAGTATATTTCTAACCATCCCATGGCTAAAATGGAAACAAAACAGACAGGTTCTAAAGGAGCAGAAGCACTTCTACACCTATCTCCTGGATCATCAATTTCTGTTGCATACCACCCTGTTTTCGGCACTCATGACAATATCATCCTTCTGGAGCTCGATGAGAAACTTCTCCCAGATGTTCTGAATGAAAGGGTGACCGTAAGAGGACAACCTGACGAAGATGCAGTTCTTTGTACTCCATCCAAAACATATGCTATGAAGTTTGTTGGAACATCCAATTCTGTTTTGCTTGTACCACCAGAAAATCAATCAAAATTATATCAAAATCTACAAGAGAGTGATGGTAATCATGATAACGAGAAGGTTGTTGCACCCGTGATCGAAGTTGTACCTGGTTATATGGAGCTTGTTGAGGTTGCCCCCAGACTCGATAAACTTAAATCACTTCTTTTAGAGAACCCTTATAAGCTTGAGGAGTATGACGCGGGAGACTTCGAAGAGAATGAGGAATCCAGGTCAGGGCTATATAACTGGAATGATCTCATAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTCTGGACTGCAGTCGCTTTCAGCGGTGGAGATTAACGGGTATTGGAGATTAGTACATGAGAGTTATATGAACATGATTCTAGAAATGCTTTTGAGAAATTCAGTGTTAAATGACTGGCCACTCGATGCTCTGAATGAAGACGAGGTTGTTAATATGCTGGAAACGGATGGATTTCCGGGTGTACTTGCTAGGCATTGTTTGCATGTATATGGTGTTAAAGTCGATGATTCCATGCATAGCTGTATCTTGAAGTTGGATAAGAGGCGGGTATGCATACATTTTGCAATAGAAATCCTGAGAGGAGGGAAGAGGAAGTTGGAGAGCTTTATAGATGAATGGAAGCAGAAGACTCCAGATGGAATGGAACCCACTTTTGATCTTTTAGAAGGAGAGGTTTTGACAGAGAAACTTGGAATCGAGACATGGGTTAGCGCTTTCAGTGTCTCTTCTTTGCCTTCTACTCCGGCTGAACGTTTCTCTATTCTTTTCAGAGAGCGGCCGAAATGGGAATGGAAAGATCTACAGCCCTATATCAGGGATCTGAAAGTACCAGGCCTGTCTGCAGAAAGTTTGCTGCTTAAATACACTCGAAGAACACAACCATCATCTGATACCGAACCTGTTTTCAGTGCAAGATAA 1596 0.4236 MKRNIEFGQSPERGREKSEMALRAAILRHVRVPIQRIRGGFDVSLRFMSSHDDHITKDEVIDRVLSVVKDFPKLDPSKVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNHPMAKMETKQTGSKGAEALLHLSPGSSISVAYHPVFGTHDNIILLELDEKLLPDVLNERVTVRGQPDEDAVLCTPSKTYAMKFVGTSNSVLLVPPENQSKLYQNLQESDGNHDNEKVVAPVIEVVPGYMELVEVAPRLDKLKSLLLENPYKLEEYDAGDFEENEESRSGLYNWNDLIDNIQASDEELRSGLQSLSAVEINGYWRLVHESYMNMILEMLLRNSVLNDWPLDALNEDEVVNMLETDGFPGVLARHCLHVYGVKVDDSMHSCILKLDKRRVCIHFAIEILRGGKRKLESFIDEWKQKTPDGMEPTFDLLEGEVLTEKLGIETWVSAFSVSSLPSTPAERFSILFRERPKWEWKDLQPYIRDLKVPGLSAESLLLKYTRRTQPSSDTEPVFSAR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1498 531 Pfam Sister chromatid cohesion protein Dcc1 175 497 IPR019128 GO:0007064|GO:0031390
Lal9g1498 531 TIGRFAM acyl_carrier: acyl carrier protein 58 132 IPR003231 GO:0006633
Lal9g1498 531 Hamap Acyl carrier protein [acpP]. 59 133 IPR003231 GO:0006633
Lal9g1498 531 Pfam Phosphopantetheine attachment site 62 116 IPR009081 -
Lal9g1498 531 SUPERFAMILY ACP-like 56 132 IPR036736 -
Lal9g1498 531 ProSiteProfiles Carrier protein (CP) domain profile. 58 133 IPR009081 -
Lal9g1498 531 Gene3D - 48 139 IPR036736 -
Lal9g1498 531 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 139 531 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1498 Lal-Chr9 17256186 17266801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1498 146 531 C3H Transcription Factor Family AT2G44580 57.653 1.04e-156 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1498 K11271 - gmx:100807595 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1498 9 17256186 17266801 Lal9g1498 9 17256186 17266801 ECH