Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1471 ATGAGTCGTAGAGTGAGGAGAAAAGTGGCAAGGAAAAGCAAAGGGAATGTGGTTTCAGGGAGTTGCCCTGAAATTCAAGACGAAGTTTTGGATTTAAAATGCCGAGGGATTGTTGATTGGACGAGCTTACCCGATGATACAGTGATTCAGTTGTTGTCATCTTTAAGTTATCGGGACCGAGCTAGTTTATCATCCACTTGTAGGACATGGAGGTCTCTTGGCAGTTCACCATGTTTGTGGACTTCTCTGGATATTCGGTCCAACAGGTTTGATGCCAATGTGGCATGTTCACTTTCTCCTAGGTGTGTCCATCTTCAGAAGCTTAGATTTCGTGGGGCAGAGTCTGCCGATGCAATAATTCATCTCCGAGCTAGGAACTTGCGTGAGTTAAGTGGTGACTATTGCAGGAAGATCACTGATGCGACTCTTGCAGTTATTGTGGCACGGCATGAGTTACTTGAGAGCCTTCAGCTTGGACCAGATTTCTGTGAGAGAATCAGTAGTGATGCTATTAAAGCAGTAGCTCATTGCTGCCCTAGATTGAACAAAATAAGGCTCTCCGGCATTAGGGACATAAATGCTGATGCTATTAACGCCTTGGCTAAGCATTGTCCAAAATTGACTGATATTGGGTTCATTGACTGTCTGAAAGTTGACGAGGTTGCATTAGGAAATGTGTCATCACTTCATTTCCTTTCTGTTGCGGGGACATCGGGCATGAAGTGGGGTGTGGTTTCCAATCATTGGCATAAGCTTCTTAACCTGATTGGGTTAGATGTTTCAAGAACTGATATTGGTCCATTTGCTGTTGCAAGGTTGTTAGCTTCATCGCAGAACTTGAGGATTTTGTGTGCTTTGGATTGTCCTATCCTTGAAGAAGATACTAGCTTTTCTGCTAGTAGATATAAGAACAAGCTATTAATTTCCATTTCTACTGATATTTTTAAAGGACTAGGTTATTTATTTTTTGATGCTACATACAAAGGTAAAAATGTGTTTTTGGATTGGAGGAATTCAAAAAAGAATGATAAGGAGCTTAATGAAATCATACCCTGGCTTGAGTGGATGCTATCCCATACACTTTTGCGATCGGCTGAGAGCCCTCAACCGGGTTTGAATAATTTCTGGGTTGAACAAGGTGCAGCACTCTTGCTTAGTCTAATGCAAAGTTCTCAAGAGGATGTTCAAGAGAGGGCAGCCACGGGTCTTGCATCTTTTGTCGTAATTGACGATGAAAATGCCAGGATTGATTGTGGTAGGGCTGAAGCAGTTATGCGCAATGGTGGCATTCGCCTCCTTCTTGACTTAGCAAAATCTTGGAGGGAAGGGCTTCAGTCTGAGGCAGCTAAGGCTATTGCAAACTTGTCCGTCAATGCCAATGTGGCCAAAGCTGTTGCAGAAGAGGGTGGAATTGATATTCTCGCTGGTTTGGCCAGGTCAGCAAGCAAGTTGGTGGCCGAAGAAGCTGCCGGGGGATTGTGGAACCTCTCTGTTGGAGAGGAGCACAAGGGTGCAATTGCTGAAGCTGGTGGAATACAAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTGGAACGTGCTGCTGGTGCATTAGCTAATTTGGCAGCTGATGACAAGTGTAGTACAGAAGTTGCTGCGGCAGAAGGTGTACATGCTCTAGTGATGCTTGCTCGTAACTGCAAATTAGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTAGCTGCTCATGGAGATAGCAATAGTAACAATGCTGCTGTTGGACAAGAAGCTGGTGCACTTGAGGCACTTGTTCAACTGACACGTTCTCCACACGAGGGTGTTAGTCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGATGATAGAAATCGAGAAGCCATTGCAGCAGCTGGTGGAGTTCAAGCCTTGGTTGCTCTTGCCCAATCATGTTCTAATGCATCCACTGGACTTCAAGAGAGGGCTGCTGGTGCACTCTGGGGATTGTCAATTTCTGAAGTCAATAGCATCGCCATTGGACGGGAAGGAGGTGTTGCACCTCTGATTTCACTGGCAAGGTCTGAAGCAGAGGATGTTCATGAAACCGCTGCTGGGGCACTATGGAATCTTGCATTCAACCCAGGTAATGCTCTTCGAATAGTGGAAGAAGGAGGAGTTTCTGCACTTGTCAATCTTTGCTCTTCATCAGTATCAAAAATGGCCCGGTTCATGGCTGCATTGGCATTGGCTTACATGTTTGATGGGAGAATGGATGAATTTGCTATAGTAGGCGCTTCATTAGAAAGTAGTTCTAAGAGTGTGAGCTTGGATGGAACTAGAAGGACTGCTTTGAAAAACATTGAAGCTTTTGTTCTCAAGTTTTCTGATACGCAAGCATTTGCGGCTGCTGCTGCATCGTCAGCTCCTGCGGCATTAGCACAGGTTACCGAAGCTGCTCGTATTCAAGAAGCAAGACATCTGAGATGCAGTGGTGCTGAAATTGGAAGATTTGTTACTATGCTACGAAGTCCATCATCGATACTCAAAGCTTGCGCGGCTTTTGCTCTTCTCCAGCTCACAATTCCCGGTGGACGACATGCTATGCACCATGCTAGCCTCATGCAGAATGCGGGAGCAGCAAGAGTTCTTCGCAGTGCAGCCGCAGCAGCAACCGCACCACTCGAAGCGAAAATCTTCGCTAGAATTGTTCTTCGCAATCTCGAGTATCACCAGATTGAGTATACAGTCTAG 2757 0.4545 MSRRVRRKVARKSKGNVVSGSCPEIQDEVLDLKCRGIVDWTSLPDDTVIQLLSSLSYRDRASLSSTCRTWRSLGSSPCLWTSLDIRSNRFDANVACSLSPRCVHLQKLRFRGAESADAIIHLRARNLRELSGDYCRKITDATLAVIVARHELLESLQLGPDFCERISSDAIKAVAHCCPRLNKIRLSGIRDINADAINALAKHCPKLTDIGFIDCLKVDEVALGNVSSLHFLSVAGTSGMKWGVVSNHWHKLLNLIGLDVSRTDIGPFAVARLLASSQNLRILCALDCPILEEDTSFSASRYKNKLLISISTDIFKGLGYLFFDATYKGKNVFLDWRNSKKNDKELNEIIPWLEWMLSHTLLRSAESPQPGLNNFWVEQGAALLLSLMQSSQEDVQERAATGLASFVVIDDENARIDCGRAEAVMRNGGIRLLLDLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSASKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVAAAEGVHALVMLARNCKLEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVSQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASTGLQERAAGALWGLSISEVNSIAIGREGGVAPLISLARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVSALVNLCSSSVSKMARFMAALALAYMFDGRMDEFAIVGASLESSSKSVSLDGTRRTALKNIEAFVLKFSDTQAFAAAAASSAPAALAQVTEAARIQEARHLRCSGAEIGRFVTMLRSPSSILKACAAFALLQLTIPGGRHAMHHASLMQNAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHQIEYTV 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1471 918 SMART arm_5 499 542 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 543 584 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 589 629 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 715 756 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 458 498 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 630 673 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 417 457 IPR000225 GO:0005515
Lal9g1471 918 SMART arm_5 674 714 IPR000225 GO:0005515
Lal9g1471 918 Gene3D Ribonuclease Inhibitor 35 313 IPR032675 -
Lal9g1471 918 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Lal9g1471 918 SUPERFAMILY ARM repeat 598 884 IPR016024 -
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 463 497 IPR000225 GO:0005515
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 422 456 IPR000225 GO:0005515
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 500 542 IPR000225 GO:0005515
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 592 628 IPR000225 GO:0005515
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 676 713 IPR000225 GO:0005515
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 630 672 IPR000225 GO:0005515
Lal9g1471 918 Pfam Armadillo/beta-catenin-like repeat 545 584 IPR000225 GO:0005515
Lal9g1471 918 Gene3D - 679 807 IPR011989 -
Lal9g1471 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 600 642 IPR000225 GO:0005515
Lal9g1471 918 SMART LRR_CC_2 124 149 IPR006553 -
Lal9g1471 918 SMART LRR_CC_2 178 203 IPR006553 -
Lal9g1471 918 SMART LRR_CC_2 204 229 IPR006553 -
Lal9g1471 918 SUPERFAMILY RNI-like 57 293 - -
Lal9g1471 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 685 727 IPR000225 GO:0005515
Lal9g1471 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
Lal9g1471 918 PANTHER PROTEIN ARABIDILLO 1 1 913 IPR044583 -
Lal9g1471 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Lal9g1471 918 SUPERFAMILY ARM repeat 341 653 IPR016024 -
Lal9g1471 918 Pfam F-box-like 40 86 IPR001810 GO:0005515
Lal9g1471 918 PANTHER PROTEIN ARABIDILLO 1-LIKE 1 913 - -
Lal9g1471 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 510 555 IPR000225 GO:0005515
Lal9g1471 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 641 686 IPR000225 GO:0005515
Lal9g1471 918 Gene3D - 590 678 IPR011989 -
Lal9g1471 918 Gene3D - 346 521 IPR011989 -
Lal9g1471 918 Gene3D - 522 589 IPR011989 -
Lal9g1471 918 SMART fbox_2 43 83 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1471 Lal-Chr9 17019309 17030556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1471 556 758 U-box Gene Family AT2G23140 34.314 1.48e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1471 - - ccaj:109792060 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1471 9 17019309 17030556 Lal9g1471 9 17019309 17030556 ECH