Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1451 ATGGTTTCTTTATCTACCCTTCCCTTTTCCCCACCCATCACACAAAACGCTGCGTTTCATTCTGTTGCATTTGTAAAGAAGCTTAATTCATTCAACAATAAGCATAGTATTAAGGAACTTAAGAGAAAGTTTGTTTGTGCTTGCATTGCTCCTCCTACTCGAAATTTCAAGAGTGAAGAAGACTCTTCTGCTATTAAATTCAATAGTTCATCCAAATCAGAACAATTAAGCACAGTGAGGGATCATGAGGGTGATTCTGATGTTCTTATTGAGTGTAGAGAAGTGTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGCGTCAGCTTTAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACGGGAAAATCTACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCAGACAAGGGAGAAGTTTATATTCGAGGTAGAAAAAGAGCTGGTTTAATAAGTGATGACGAGATATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAAAATTCAAGCATGTCAGAGGACCAGATATCAGATCTTGTCACAGAAAGCTTGGCTGCAGTTGGATTGAAGGGAGTTGAGGATCGGATGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGGTCTATTATTTATGACACTACAAAGGATTCAATAGAGCCAGAGGTGCTCTTGTATGATGAACCAACTGCTGGACTTGATCCCATTGCATCTACTGTTGTCGAGGATCTTATTCGTTCTGTGCACATTAAAGGACACAATGCACTTGGTAAACCTGGGAATATTACATCTTATGTGGTTGTCACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGGCTGTTATTTCTGCACAAGGGAAAGCTTGTTTGGGAAGGAATGACCAATGAATTTATGACTTCAACAAATCCAATTGTTCAGCAATTTGCATCTGGGAGCCTGGATGGCCCTATCAAATATTAG 1053 0.397 MVSLSTLPFSPPITQNAAFHSVAFVKKLNSFNNKHSIKELKRKFVCACIAPPTRNFKSEEDSSAIKFNSSSKSEQLSTVRDHEGDSDVLIECREVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGRKRAGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSSMSEDQISDLVTESLAAVGLKGVEDRMPSELSGGMKKRVALARSIIYDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGHNALGKPGNITSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTNEFMTSTNPIVQQFASGSLDGPIKY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1451 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 20 350 - -
Lal9g1451 350 SMART AAA_5 114 318 IPR003593 -
Lal9g1451 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Lal9g1451 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524
Lal9g1451 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Lal9g1451 350 Gene3D - 76 342 IPR027417 -
Lal9g1451 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 20 350 - -
Lal9g1451 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 332 IPR027417 -
Lal9g1451 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1451 Lal-Chr9 16536086 16541822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1451 89 330 Calmodulin-binding Proteins AT2G36910 28.295 6.98e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1451 - - gmx:100783283 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1301 2 10183215 10192277 Lal9g1451 9 16536086 16541822 LSH