Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1424 ATGGCCACCATTCCTTCTATTCTAAACTCAACTAGCTCCTCCTTTCTCTCTCACTTTCCTTTCTCTCATTCTCCATTATCTTCTCCTTCACTCTTCCCTCATCGAAAAAACCATAGAAATGTCGTGTTTCCTGTGAAAGCTTCTGGTGCTGCTGTGTTAGTTGAGAAATCTGAGGCAGAAAATGTCAATAGACTCAAAACTACTTACAATGAGAAAATCATTCCATTGCTCATGGAAGAGTTCTCATATACCAACAAACACCAGGTGCCTAAAGTCGATAAGATTGTGGTTAACTGCGGTATTGGAGATGCTGCACAAAATGCAAAGGGTTTAGAAGCAGCAATGAATGATCTAGCTAAAATCACAGGGCAGAGACCTATTAAGACCCGGGCCAGGGCCTCCGTTGCAACCTTCAAGATCAGGGAAGGCCAACCGCTTGGAATTGCTGTGACACTCAGAGGAAATACAATGTACTCATTCCTAGACAGAGTTGTGAACTTGGGACTTCCCAGGACAAGAGATTTCCAGGGTGTAAACCCCAACAGCTTTGATGGTCATGGGAATTATAGCATCGGCGTTACAGATCAGAGTGTGTTTCCGGAGATCAGATATGATGCTATTGGTAAGCCTAGGGGAATGGATATCTGCATCACGACAACGGCCAAAACCGATCAAGAATCGCAGAGATTATTGGCTCTTATGGGCATGCCTTTCAGGGAGGGAGGTGGTCCGGCCACAATAGTTCGCAAAAAGAAGCTGAAATCTCATCATTTTGATGCAAAGGGAAAAGGAGGAAGGAAGTAA 804 0.4428 MATIPSILNSTSSSFLSHFPFSHSPLSSPSLFPHRKNHRNVVFPVKASGAAVLVEKSEAENVNRLKTTYNEKIIPLLMEEFSYTNKHQVPKVDKIVVNCGIGDAAQNAKGLEAAMNDLAKITGQRPIKTRARASVATFKIREGQPLGIAVTLRGNTMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGVTDQSVFPEIRYDAIGKPRGMDICITTTAKTDQESQRLLALMGMPFREGGGPATIVRKKKLKSHHFDAKGKGGRK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1424 267 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lal9g1424 267 Pfam Ribosomal protein L5 85 141 IPR031310 -
Lal9g1424 267 SUPERFAMILY RL5-like 64 239 IPR022803 -
Lal9g1424 267 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Lal9g1424 267 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 58 240 - -
Lal9g1424 267 Gene3D - 56 240 IPR022803 -
Lal9g1424 267 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Lal9g1424 267 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 58 240 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1424 91 218 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.344 2.15e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1424 K02931 - gmx:100818896 402.134