Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal9g1398 | ATGGATATGGCTTGTAGCTTAACACAGTCAAGAATGTTACATGGAGGTGTGGTAGGGTATAGTAACAGACACAACATATCACTAGGTCATTTTGATTCCAGAGCGAGATGTTTTTTGACTAGTGTTTCGAAGTTGCGATTTGCTGGGAGGAGCAGAGTTAGTGGTGTTTCTGTTGGGGAGTTTAATGTTCGGAATTCGAAGAGAACGTTGTCTTGTAGAAATAATAAGAATAATATTCTTTTATTGGGGTCTAGAGTAGTTTGGTCAAAGTGCCAGGGTAGTGATTCTTTAGCATATGTTGATGGCGATGGCCGGAAAGTTGATTGTGTGGAAGGTTCGGGTGAGGACTCGGGGTTGGGGTCTGTTTCGGGTGCTGAACTGGATGCACCATTGGAAGATGAAGAAGAAGGGGAGAAGGAAGGAGTCGAGGACCAAAATGTGGTTGAACTGCAAGAAGCATTGCAAACTGCTTTGAAGGAGCTAGAAGTTGCACAAGTAAATAGTACCATGTTTGAAGAAAAGGTTAAAAGAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCAGAAAGTGCTTGGAATGATGTTAATTCTGCTATTAACACCGTCCAAGAAATTGCTAATGAAGAACAAATTGCCAAAGAAGCTGTCCATAATGCAACAATGGCTCTTTCATTAGCCAAGGCAAGGCTTCAAGTAGACTTAGAATCTTCGGAGGCTACAAAAGAAGTGCATGATACAGATAATGGCATAACAGAAGAGGATAAAGCACTTTTGATTGCTCAAGAAGATGCCAAGGAATGCCAGACAAAATTAGCCACTTGTGAGGAAGAGCTGAAGCTCTTGCAAAATAGAAAGGAGGAGTTGCAGAAGGAAGTGGACAGATTGCATGAAATTGCTGAAAAGGCACAACTGAATGCTGTGAAAGCTGAGGAAGATGTTACAAACATCATGCATTTAGCTGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAACGTGTAAATGATGCCGAGATTGCCTTACAGCAAGCGGAGAAATCTTTTTCTAATTTTAATGCTGATACAATAGAAACTGTACAAGTTCAAGATGTTCCTGATGTTGAGAAAGTGGTTCAAGGGTCGTCTGCTGATGTCATTGTTGAAAGAGATGGAGATCTGCCAACTGATGATGAATCTTTACTTGCCAAGTTATCACCTGAAACAAAATCTGATAAAACCAGCCAAACATTGGATGACATAACACAGTCTGATTATTTGAGTGATAATGAGAATGCGGTTCAAACAAAAAAGCAGGAAACTCAGAAAGACATGAGTTCACCCTATGCTCCCAAGACATTACTGAAGAAATCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTCTAATGAAGATGGGTCTGAGTTCTCTCCAGAATCCGTTTTCCAGGGCCTCATGTTATCTGCACAGAAACAGTTGCCCAAGCTGGTTCTTGGGTTACTGTTATTGGGAGCAGGGGTCACCTTCTATTTCAATAGAGCAGAGAGGAATACTCAGCTTCTTCAACAGCCAGATGTTATTGTAACCAGTGTTGAAGAAGTTTCCTCTAGTGCTAAACCTCTGATTAGGCAGCTTAAGAAACTCCCTAAGAAAATTAAGAAAATTATTGCGTCACTGCCTCATCAAGAGGTGAATGAGGAAGAAGCCTCTCTCTTTGACATGCTGTGGTTACTACTAGCAAGTGTCATATTTGTGCCAATATTTCAAAAGCTTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCATGTTCATGGGACAAAAGCAATTGCTGAATTTGGAGTTGTTTTCCTTTTGTTCAATATTGGCCTAGAGCTCTCTGTAGAAAGGCTTAGTTCAATGAAGAAATATGTCTTCGGATTAGGCTCTGCACAGGTTTTGGTGACTGCTGTAGTTGTTGGCTTGGTGGCTCATTATATCTGTGGCATACCCGGCCCTGCTTCCATTGTCATTGGGAATGGCCTGGCATTGTCATCCACCGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCCCGACATGGGCGAGCTACATTTTCGGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATACCTCTCATTTCACCTAACTCTTCCAAAGGAGGGATTGGATTTCAAGCCATTGCTGAAGCTCTTGGACTGGCAGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCGGGCGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATATTCTCTGCCAATACACTACTTGTTATTCTTGGAACTAGTCTTCTTACAGCCAGGGCAGGACTATCCATGGCACTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTAGGGCTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTCCCAGTCATCACAGGGACACTGGGACTCTTAATATGTGGCAAGACTATCTTGATTTCTTTGATTGGTAGAATCTTTGGAATTTCCCTCATTTCTGCCCTAAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTCGTGGCTTTTGGTGATGCTGTTAATCAGGGCATAATGTCTTCCAAGTTGTCCTCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCAATCACGCCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAACATGATGTTCGGAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGGTCATATCATTATTTGTGGATTTGGACGAGTTGGGCAGATCATTGCCCAACTTCTTTCTGAGCGACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGGCAATAGGGAGAGCAATGGATCTTCCTGTATACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGATTGGTGCTGAAAGGGCATGTGCCGCAGCAATAACTCTAGATACGCCGGGTGCAAATTATAGAACAGTTTGGGCTTTGAGCAAATACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTGCTCAGGCTAAGCTTCCCACATCGGAGATTGCAGCAACCGTAAATGAATTCAGATCCCGCCATCTGAGTGAGCTCTCAGAGCTTTGTGAAGAAAGTGGAAGTTCTCTTGGTTATGGTTATAATAGAATTATGAGCAAACCCAAATCTCAAACCCCAGATTCATCAGATGAGACCCAATTGTCTCAAGGGACACTTGCAATTTGA | 3507 | 0.4274 | MDMACSLTQSRMLHGGVVGYSNRHNISLGHFDSRARCFLTSVSKLRFAGRSRVSGVSVGEFNVRNSKRTLSCRNNKNNILLLGSRVVWSKCQGSDSLAYVDGDGRKVDCVEGSGEDSGLGSVSGAELDAPLEDEEEGEKEGVEDQNVVELQEALQTALKELEVAQVNSTMFEEKVKRISETAISLHDEAESAWNDVNSAINTVQEIANEEQIAKEAVHNATMALSLAKARLQVDLESSEATKEVHDTDNGITEEDKALLIAQEDAKECQTKLATCEEELKLLQNRKEELQKEVDRLHEIAEKAQLNAVKAEEDVTNIMHLAEQAVAFELEATQRVNDAEIALQQAEKSFSNFNADTIETVQVQDVPDVEKVVQGSSADVIVERDGDLPTDDESLLAKLSPETKSDKTSQTLDDITQSDYLSDNENAVQTKKQETQKDMSSPYAPKTLLKKSSRFFSASFFSSNEDGSEFSPESVFQGLMLSAQKQLPKLVLGLLLLGAGVTFYFNRAERNTQLLQQPDVIVTSVEEVSSSAKPLIRQLKKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGIPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGTLGLLICGKTILISLIGRIFGISLISALRVGLLLAPGGEFAFVAFGDAVNQGIMSSKLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQGHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAMDLPVYFGDAGSREVLHKIGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATVNEFRSRHLSELSELCEESGSSLGYGYNRIMSKPKSQTPDSSDETQLSQGTLAI | 1168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal9g1398 | 1168 | Gene3D | - | 560 | 948 | IPR038770 | - | |
Lal9g1398 | 1168 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 1 | 1168 | - | - | |
Lal9g1398 | 1168 | MobiDBLite | consensus disorder prediction | 1145 | 1168 | - | - | |
Lal9g1398 | 1168 | MobiDBLite | consensus disorder prediction | 128 | 142 | - | - | |
Lal9g1398 | 1168 | Pfam | Sodium/hydrogen exchanger family | 570 | 940 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Lal9g1398 | 1168 | Coils | Coil | 147 | 167 | - | - | |
Lal9g1398 | 1168 | MobiDBLite | consensus disorder prediction | 111 | 142 | - | - | |
Lal9g1398 | 1168 | Gene3D | - | 970 | 1131 | - | - | |
Lal9g1398 | 1168 | Pfam | TrkA-N domain | 973 | 1086 | IPR003148 | GO:0006813 | |
Lal9g1398 | 1168 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 969 | 1110 | IPR036291 | - | |
Lal9g1398 | 1168 | Coils | Coil | 328 | 355 | - | - | |
Lal9g1398 | 1168 | TIGRFAM | 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family | 571 | 851 | IPR004771 | GO:0006812|GO:0008324|GO:0016021 | |
Lal9g1398 | 1168 | MobiDBLite | consensus disorder prediction | 397 | 443 | - | - | |
Lal9g1398 | 1168 | ProSiteProfiles | RCK N-terminal domain profile. | 972 | 1094 | IPR003148 | GO:0006813 | |
Lal9g1398 | 1168 | PANTHER | K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED | 1 | 1168 | - | - | |
Lal9g1398 | 1168 | MobiDBLite | consensus disorder prediction | 1143 | 1168 | - | - | |
Lal9g1398 | 1168 | Coils | Coil | 258 | 313 | - | - | |
Lal9g1398 | 1168 | MobiDBLite | consensus disorder prediction | 400 | 441 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal9g1398 | Lal-Chr9 | 15747867 | 15766115 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal9g1398 | 1 | 1168 | Inorganic Solute Cotransporters | AT4G00630 | 67.601 | 0.0 | 1431 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal9g1398 | - | - | gmx:100798822 | 1644.02 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal9g1398 | 9 | 15747867 | 15766115 | Lal9g1398 | 9 | 15747867 | 15766115 | ECH | |
Lal9g1398 | 9 | 15747867 | 15766115 | Lal6g0939 | 6 | 6537374 | 6550380 | LSH | |
Lal9g1398 | 9 | 15747867 | 15766115 | Lal6g0939 | 6 | 6537374 | 6550380 | PCT | |
Lal6g0939 | 6 | 6537374 | 6550380 | Lal9g1398 | 9 | 15747867 | 15766115 | PCT |