Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1380 ATGCCTCGTGGTACCCTTGAAGTTATTCTTGTCAGCGCAAAAGGCCTTCCTAATGCTGATTTTCTCACAGAAAAAATGGATCCATATGTGGTTCTCAGTTATAGGGCACAAGAGCACATAAGCAGTGTGGCTGAAGGTGCAGGATCAGACCCTATTTGGAATGAAAGCTTCCTTTTCACAGTTTCAGACAATGTTTCTGAGCTGAAACTGAGGTTTATGGACAAAGATGATTTTACTGATGATGACTACCTTGGTGAAACAAATATATTTTTGGAACCAGTGTTTTATGAGCAGAGCATTGGAGAAACTGTTTACAATGTTGTTAAGGAAGATAAGTACTCTGGGGAGGTTAAGGTTGCTCTCCGTTTTCATCCTGAGGTAAATTCCTATACCAATATCACAACAATAACTACCTATTTAATTGCAATACTAAAATTTGTCACAAATTATCGTGGTGAAGATGGAAGCAATGTTGGTGGATGGAGAGAATCATAG 495 0.3879 MPRGTLEVILVSAKGLPNADFLTEKMDPYVVLSYRAQEHISSVAEGAGSDPIWNESFLFTVSDNVSELKLRFMDKDDFTDDDYLGETNIFLEPVFYEQSIGETVYNVVKEDKYSGEVKVALRFHPEVNSYTNITTITTYLIAILKFVTNYRGEDGSNVGGWRES 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1380 164 Pfam C2 domain 4 98 IPR000008 -
Lal9g1380 164 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 127 - -
Lal9g1380 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 127 IPR035892 -
Lal9g1380 164 Gene3D C2 domain 2 126 IPR035892 -
Lal9g1380 164 SMART C2_3c 5 103 IPR000008 -
Lal9g1380 164 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Lal9g1380 164 PANTHER C2 DOMAIN-CONTAINING 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1380 Lal-Chr9 15515309 15518021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1380 4 95 C2H2 Transcription Factor Family AT4G21160 32.609 6.59e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1380 - - gmx:100814819 161.77