LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal9g1374	ATGGACGAGACCGAAATCTTAGCATCGATTCATTCTCTAGACAGCACAAAACCATGGTTTGAATCTGTCATTGATTTCATTGCTGAAGCTACAATGGAAGAAGATGAACAAGAAGAGACTTTAGCCCCTCAACTTCTTTATGCCTATGAAACAAGCATGTTTGGTTTTGCAGCCTCACTTTCTGAGAAACAACTTAAATACTTGAACCAAGTTGATGGTTTTCTTACAGCCATCCCTGATGAACTATTAACCCTCCACACAACATACACCTCACATTTTCTTGGCCTAAAAAATGGAATCGGACTTTGGAGTGCTCCGAACTTGGCATCGGATGTTATCATTGGCGTCCTTGATTCAGGGATATGGCCTGAACACATCAGTTTCCGAGACTCGGGTCTGTCTGCAGTACCGCATCGTTGGAAAGGTGTTTGTGAACAAGGCACCAATTTCTCTATATCAAATTGTAACAAGAAGCTTATTGGTGCAAGGGCCTATTTCAAAGGGTACGAAAAATCTGTCGGAAAAATCAACGAAACGGTGGATTATCTTTCCCCTAGAGACTCCCAAGGGCATGGAACACACACTGCCTCAACTGCAGCCGGAGATATTGTCCAAAATGCTGAATCTTTGGGGCAGGCGAAAGGTTCGGCAAGTGGAATGAGGTATTCCTCAAGAATTGCAGCTTATAAAGTATGCTGGCATTCTGGCTGTGCCAATTCTGACATAATAGCAGCCATGGACCAAGCAGTTTCTGATGGAGTTGATGTATTATCACTCTCTTTAGGAGGTTTTCCTAGACCTTTTTACAATGATAGTATTGCAATATCCTCATTTGGGGCAACCCAAAAAGGTGTTTTTGTTTCTTGTTCTGCAGGCAATTCAGGCCCTTATGAATCAACAGTTGGAAATGGTGCCCCATGGATCATGACAGTTGCTGCTAGCTATACTGACAGAACTTTCCCGACAAAAGTCGAGCTCGGAAACCGAAAGATTTTTACAGGATCGTCTTTATACAAAGGCAAGCAAACAAACCAATTGCCACTTGTCTATGGAAAATCAGCAGGAACAAAAAGGGAAGCACAGTTTTGCACCAAAGGCTCACTTGACTCAAAGCTTGTGCATCGAAAAATAGTTGCTTGCGAAAGAGGACTAAACGGTAGAACCGAAAAGGGAGAGGCAGTGAAAATAGCAGGTGGAGCAGGAATGATACTACTTAACTCAAAAAGCCAAGGACAAGAGCTTTTTGCTGACCCTCACATTTTGCCAGCCACTTCCATAGGGGCTTCAGAAAGTGATATTATTAGAACCTATATCAACTCTTCTAAAACTCCAACAGCTTCAATTTCCTTCATAGGCACAAAATATGGTGACCCTGCACCAATAATTGCAGCATTTTCTTCTAGAGGACCAAGCATAGCAGGACCAGATGTGATTAAGCCAGATATTACTGCACCTGGTGTAAACATCTTGGCTGCATGGCCATCAAAAACTAGCCCAAGCATGCTCAAGAGTGACCAAAGAAGTGTAGTATTTAACATAATCTCAGGTACTTCAATGTCTTGTCCTCATGTTAGTGGCATAGCAGCACTTCTTAAGTCTATGCATAAAGATTGGTCGCCTGCATCTATCAAATCAGCTCTAATGACTACTGCTTACACATTCAACAATAAAGGAACTCCAATTACTGATATTGGTTCAAATAACTCATTTGCTAACCCTTTTGCATTTGGTTCAGGCCATGTTAAGCCAGAAAGTGCATCTGATCCTGGTTTAGTCTATGATATAAGCACCAAAGATTACTTAAATTACTTATGCAGCTTAAACTATACCTCTTCACAGATTGGTTTATTATCAAAAAGTAATTTTGCATGTCCTAAAAAACCAGCTTTTCAAGTTGGTGAATTAAACTACCCTTCATTTTCTGTTCTATTAGGAAAAGGTTCAGTGAATGCTAGTGTGACATACAAGAGAGTTGTCACAAATGTTGGAAAACCACAAAGTAACTATGTAGTTAAAGTTGAACAACCAAATGGTGTTTCAGTTAGTGTTGTACCAAGAAATTTGAAGTTTGAAAAAATGGGTCAGAAATTGAGTTACCATGTGACATTTTTTGCATTTGGAAGAGCAAGAGTTTCTGGTGTCTCATCATTTGGGTCACTCATTTGGGTATCTGAGAAATATAAGGTTCAAAGTCCAATAGCAGTAACTTGGCAATAG	2217	0.4041	MDETEILASIHSLDSTKPWFESVIDFIAEATMEEDEQEETLAPQLLYAYETSMFGFAASLSEKQLKYLNQVDGFLTAIPDELLTLHTTYTSHFLGLKNGIGLWSAPNLASDVIIGVLDSGIWPEHISFRDSGLSAVPHRWKGVCEQGTNFSISNCNKKLIGARAYFKGYEKSVGKINETVDYLSPRDSQGHGTHTASTAAGDIVQNAESLGQAKGSASGMRYSSRIAAYKVCWHSGCANSDIIAAMDQAVSDGVDVLSLSLGGFPRPFYNDSIAISSFGATQKGVFVSCSAGNSGPYESTVGNGAPWIMTVAASYTDRTFPTKVELGNRKIFTGSSLYKGKQTNQLPLVYGKSAGTKREAQFCTKGSLDSKLVHRKIVACERGLNGRTEKGEAVKIAGGAGMILLNSKSQGQELFADPHILPATSIGASESDIIRTYINSSKTPTASISFIGTKYGDPAPIIAAFSSRGPSIAGPDVIKPDITAPGVNILAAWPSKTSPSMLKSDQRSVVFNIISGTSMSCPHVSGIAALLKSMHKDWSPASIKSALMTTAYTFNNKGTPITDIGSNNSFANPFAFGSGHVKPESASDPGLVYDISTKDYLNYLCSLNYTSSQIGLLSKSNFACPKKPAFQVGELNYPSFSVLLGKGSVNASVTYKRVVTNVGKPQSNYVVKVEQPNGVSVSVVPRNLKFEKMGQKLSYHVTFFAFGRARVSGVSSFGSLIWVSEKYKVQSPIAVTWQ	738

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal9g1374	738	Pfam	Fibronectin type-III domain	634	735	IPR041469	-
	Lal9g1374	738	Gene3D	-	317	455	-	-
	Lal9g1374	738	SUPERFAMILY	Subtilisin-like	85	591	IPR036852	GO:0004252\|GO:0006508
	Lal9g1374	738	ProSitePatterns	Serine proteases, subtilase family, serine active site.	516	526	IPR023828	-
	Lal9g1374	738	Gene3D	-	604	737	-	-
	Lal9g1374	738	Gene3D	Peptidase S8/S53 domain	111	600	IPR036852	GO:0004252\|GO:0006508
	Lal9g1374	738	PRINTS	Subtilisin serine protease family (S8) signature	109	128	IPR015500	-
	Lal9g1374	738	PRINTS	Subtilisin serine protease family (S8) signature	187	200	IPR015500	-
	Lal9g1374	738	PRINTS	Subtilisin serine protease family (S8) signature	515	531	IPR015500	-
	Lal9g1374	738	ProSiteProfiles	Serine proteases, subtilase domain profile.	88	587	-	-
	Lal9g1374	738	CDD	Peptidases_S8_3	83	552	IPR034197	-
	Lal9g1374	738	Pfam	Subtilase family	110	562	IPR000209	GO:0006508\|GO:0008236
	Lal9g1374	738	Pfam	PA domain	347	430	IPR003137	-
	Lal9g1374	738	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	4	86	IPR037045	-
	Lal9g1374	738	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.1	1	738	-	-
	Lal9g1374	738	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	1	738	IPR045051	-
	Lal9g1374	738	CDD	PA_subtilisin_like	324	448	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal9g1374	Lal-Chr9	15435289	15437505	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal9g1374	10	738	Subtilisin-like Serine Gene Family	AT1G01900	58.254	0.0	847

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal9g1374	9	15435289	15437505	Lal9g1374	9	15435289	15437505	ECH