Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1341 ATGTTGGAGTATGAATGGGATAACCCATCAACAACAATGCTCACTGGAAATGAAGGCGGCGCCACCACAAAACCCGACCAAACCCACCACCAAACTTTGAATCACAACCACACCTTTCTACCTGAACCTAACCAATTCCTTAGTCCCACACTCACCACCACCAACACCACCACCACTGATTTCTCTCACTACCACTTCTTCAACTTCAACCCACCACACCCACCACAAAATCACCCTTTCTTTCACCCACGCGCCACCCATAGCGCGTCTACACCTTCTTTCTCAACCCTACCACCATCCATGCTCTCCCTTAACCAGTTCCCACCTCTCAACCGCACCAGCTACGGGCCCCAGCCCGGGCCTATCCCAGTGTCTAACTCGGGACGTGTTTATTGGCCCACGGGCTTCTCGGGCTCAGACGGGCTTGGGCTCAACCTGGGTATACGAACATGCTTCCCTTCTTCCTCTCTAGTTGAACCGGGTTTGACCAGTTCATCATTAATGTCTAACTCGCCGCGGTGCCAGGTGCAGGGCTGCAACGCTGACCTCTCCGACGCGAAACTCTACCACCGCCGCCATAAGGTGTGTGAGTTTCACTCCAAAGCCGCCACCGTCATAGCTGCCGGTTTAACTCAGCGGTTTTGCCAGCAGTGCAGCAGGTTGCATTTGAACCTTAATGATTCCGGTGTTTTAAACTACACAGTTGTTGCGCATAATATCCGGATTTCAAAAGAATTAAAAGGAACAGTCAATTTTGTCTATCAAGATTTTAGACTGCAAAAAATGATGTTCCATCTTCTATCAGAGTTTGATGATGGAAAACGTAGCTGCAGGAAGAGACTCGAAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCAAACTCAAGAAAACCAGAACTACTAG 906 0.4934 MLEYEWDNPSTTMLTGNEGGATTKPDQTHHQTLNHNHTFLPEPNQFLSPTLTTTNTTTTDFSHYHFFNFNPPHPPQNHPFFHPRATHSASTPSFSTLPPSMLSLNQFPPLNRTSYGPQPGPIPVSNSGRVYWPTGFSGSDGLGLNLGIRTCFPSSSLVEPGLTSSSLMSNSPRCQVQGCNADLSDAKLYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRLHLNLNDSGVLNYTVVAHNIRISKELKGTVNFVYQDFRLQKMMFHLLSEFDDGKRSCRKRLEDHNRRRRKTQQQTQENQNY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1341 301 MobiDBLite consensus disorder prediction 282 301 - -
Lal9g1341 301 Coils Coil 274 294 - -
Lal9g1341 301 Pfam SBP domain 174 222 IPR004333 GO:0003677
Lal9g1341 301 Pfam SBP domain 260 290 IPR004333 GO:0003677
Lal9g1341 301 MobiDBLite consensus disorder prediction 1 26 - -
Lal9g1341 301 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 138 296 IPR044817 GO:0003677
Lal9g1341 301 MobiDBLite consensus disorder prediction 8 26 - -
Lal9g1341 301 Gene3D - 165 278 IPR036893 GO:0003677|GO:0005634
Lal9g1341 301 SUPERFAMILY SBT domain 249 296 IPR036893 GO:0003677|GO:0005634
Lal9g1341 301 ProSiteProfiles Zinc finger SBP-type profile. 171 291 IPR004333 GO:0003677
Lal9g1341 301 SUPERFAMILY SBT domain 172 223 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1341 Lal-Chr9 14826621 14828930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1341 1 221 SBP-box Gene Family AT1G02065 36.466 1.99e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal9g1341 SBP 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1341 - - lang:109360145 344.739