Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1266 ATGGAAAACAATGTGGGATATGAGAATGATCTCAACCTTACGGCAACAGAGCTAAGATTGGGGTTGCCAGGGACAGTGGAAAAGGAAGAGAAAACAATTCAAGGTGGTGTTAAAAACAACAAAAGGCAATTGCCAGAAACTTCTGAAGAGTCTGTTTCCATTTCCAAAAATTCTAAAGGGAAGCATGCAGAGAGTGATGCAGACCCTCCTGCCAAGGCAAAGATAGTTGGGTGGCCACCAATAAGATCCTACAGGAAAAACAGCCTGCAGGAGACAGAGGGTGCTGGGATCTTTGTGAAAGTGAGCATGGATGGAGCCCCTTATCTAAGAAAGATTGACTTGAAGGTCTATGTAGGCTATCTAGAACTCCTCAAAGCTCTTGAAATCATGTTCAAGTTGACCATTGGTGAATACTCTGAAAGAGAGGGTTATAAGGGATCTGAATATGCACCTACATATGAAGACAAGGATGGTGACTGGATGCTTGTGGGAGATGTACCCTGGGAGTAA 510 0.4373 MENNVGYENDLNLTATELRLGLPGTVEKEEKTIQGGVKNNKRQLPETSEESVSISKNSKGKHAESDADPPAKAKIVGWPPIRSYRKNSLQETEGAGIFVKVSMDGAPYLRKIDLKVYVGYLELLKALEIMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1266 169 SUPERFAMILY CAD & PB1 domains 87 169 - -
Lal9g1266 169 MobiDBLite consensus disorder prediction 26 74 - -
Lal9g1266 169 Gene3D - 90 169 - -
Lal9g1266 169 MobiDBLite consensus disorder prediction 55 69 - -
Lal9g1266 169 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 169 IPR003311 GO:0005634|GO:0006355
Lal9g1266 169 Pfam AUX/IAA family 39 169 IPR033389 -
Lal9g1266 169 PANTHER AUXIN-INDUCED PROTEIN 1 169 - -
Lal9g1266 169 MobiDBLite consensus disorder prediction 37 54 - -
Lal9g1266 169 ProSiteProfiles PB1 domain profile. 96 169 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1266 Lal-Chr9 12483810 12486772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1266 99 168 B3 DNA Binding Superfamily AT2G46530 41.429 3.03e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lal9g1266 AUX_IAA 1.8e-36 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1266 K14484 - gmx:100800212 265.003