Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1187 TTAGAGAAAAAACATGGGAATGATGGATCTTCATATCAAGATCAAGTGTTTGAAATGCCGTTGTCGCAATTCAGGTTGAAACAGTTTATATTAGGAATTGGAGGCAGAAAGAGAAATCATGGAACTGCAAAAAGGCCTTCATGGATGATGCCAGTAACACATGGTTATCATGTGGTGGAGCATCATGTAATCAATGATGACTCTAATGACTCAGATTTTGATTCAGTTGTGTTTCAGAGGGAGCAAATAGATCAAACAGAACTGTGGTATTTTGGCATCTTTGATGCTCTAATTGGAGATGGGATCTTCAAGTATATGCAGTCTCATTTCTTTGACAAGAAGCTCACACAATCTCATATGAGGAGAAAAACCAAAGAAACACTGAAGAGGGCTTACTTGACCGCAAAAGCAAAGATAAGAGAGGGAAATAAATCAGAGGAGACATGCAGAATAGGTTCAACATCTGTGATGGTGATAAATGGAGAAAAACTTGTGATAGCAAACTTGGGAGATTACAGAACTGTTTTGTGTAAAAATGGCATAGCTCAACAGATAACTGGTATGCACAAAAAATCAACCAAGATAAATTGGTTTCATGCACTCTTTTCAGGTACAAAGGATTCTACAGGTTCAGAGCTTGTTGTGGGAGTTGACAAGATTGACTCTGATACTGATTTTTTGATCTTAGCGAGCAATGGCATTTGGGAGGTGATGAAGGATCAAGAAGCTGTGAATCTTATTAGGCACATAGAGGATCCACAAGAAGCAGCAGAGTGCTTGGCAAATGAAGCTTTGAGTAGGATGAGCAAATGCAACATCTCATGCTTAATTATTCGCTTTGACTGA 846 0.3865 LEKKHGNDGSSYQDQVFEMPLSQFRLKQFILGIGGRKRNHGTAKRPSWMMPVTHGYHVVEHHVINDDSNDSDFDSVVFQREQIDQTELWYFGIFDALIGDGIFKYMQSHFFDKKLTQSHMRRKTKETLKRAYLTAKAKIREGNKSEETCRIGSTSVMVINGEKLVIANLGDYRTVLCKNGIAQQITGMHKKSTKINWFHALFSGTKDSTGSELVVGVDKIDSDTDFLILASNGIWEVMKDQEAVNLIRHIEDPQEAAECLANEALSRMSKCNISCLIIRFD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1187 281 Pfam Protein phosphatase 2C 218 272 IPR001932 -
Lal9g1187 281 Pfam Protein phosphatase 2C 87 192 IPR001932 -
Lal9g1187 281 SMART PP2C_4 64 278 IPR001932 -
Lal9g1187 281 SUPERFAMILY PP2C-like 77 281 IPR036457 -
Lal9g1187 281 CDD PP2Cc 90 280 IPR001932 -
Lal9g1187 281 Gene3D - 203 281 IPR036457 -
Lal9g1187 281 Gene3D - 60 197 IPR036457 -
Lal9g1187 281 PANTHER ALPHABET, ISOFORM E-RELATED 21 280 - -
Lal9g1187 281 ProSiteProfiles PPM-type phosphatase domain profile. 70 280 IPR001932 -
Lal9g1187 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 21 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1187 Lal-Chr9 11060509 11062700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1187 21 280 PP2C-type Phosphatase Gene Family AT3G23360 47.584 3.98e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1187 K19704 - gmx:100794054 380.563