Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1053 ATGCATAACATTTGTCTCAACATGCCACAAATGGTTGAAACCATTGACCCAGAGGACTTTTTCACACGTCGCTGCATATGGGTGAATGGACCTGTAATAGTTGGTGCAGGTCCTTCAGGCCTTGCAGTTTCAGCATGCCTCAAAGATCAAGGTGTTCCATTCATAGTTCTTGAAAGAGCAAATTGCATTGCATCTCTTTGGCAAAACCGAACCTATGATCGTCTCAAACTTCACCTTCCCAAACAATTTTGTCAGCTACCCAATTTCCCTTTCCCTGAAGACTTCCCTGAATACCCAACAAAATTTCAGTTCATAAAGTACCTTGAGTCCTACGCAAACCACTTCAACATAACCCCACAGTTCAATGAAACAGTGCAATCTGCTAAGTATGATGAGACCTTTGGGTTGTGGAGGGTTAAGACCGTTAGGAAAAGTCACTTGTGTAATCGTCCCAATGAATATGACTACATTTGTAGGTGGCTGGTGGTTGCTACCGGCGAAAATTCGGAGAAAATTGTGCCTGAATTTGAAGGGTTGGAAGAGTTTGGTGGGCATGTCATGCATGCTTGTGATTACAAATCTGGGCAGAGTTATTATGGGCAGAAAGTTCTTGTTGTTGGGTGTGGAAATTCAGGCATGGAAGTTTCCCTTGATCTCTGTAACCATAATGCAACACCAATAATGGTGGTTCATGTGTTGCCAAGAGAAGTTTTTGGAAAATCAACTTTTGAAGTTGCAGTGAAGTTGATGAAACGTTTACCTCTTAAGGTGGTTGATAAGATATTGTTGATTCTATCTTGTTTGATTTTGGGAAATGTGGAAAAGTATGGTCTTAAAAGGCCATCAAAGGGACCTTTAGAACTGAAAAACAGTACAGGGAAAACCCCTGTGCTAGACATTGGAGCACTTAAGAAAATAAGGTCAGGTAAAATCAATGTTGTTCCTGGAATCAAAAGATTCTTGCCAGGGAATGTTGAATTTGTTGATGACAGAGTTCTTCAGATTGATTCTGTTGTTCTTGCTACTGGCTATCGCAGCAATGTTCCATCATGGCTTAAGGAGAATGAATTTTTTTCCAAAGATGGGATTCCAAGAAATCCATTTCCAAATGGATGGAAAGGAAGTGCAGGTCTTTATGCTGTTGGGTTCACAAGGAGAGGCCTTTCTGGTGCATCTTTGGATGCAATTAGTGTGTCACATGACATTGCCAAAAGCTGGAAAGAAGAGACTAAACAGAAGAAGAAATCTGTGGCTACACGCCACAGAAGATGCATATCACACTTCTAA 1287 0.411 MHNICLNMPQMVETIDPEDFFTRRCIWVNGPVIVGAGPSGLAVSACLKDQGVPFIVLERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFIKYLESYANHFNITPQFNETVQSAKYDETFGLWRVKTVRKSHLCNRPNEYDYICRWLVVATGENSEKIVPEFEGLEEFGGHVMHACDYKSGQSYYGQKVLVVGCGNSGMEVSLDLCNHNATPIMVVHVLPREVFGKSTFEVAVKLMKRLPLKVVDKILLILSCLILGNVEKYGLKRPSKGPLELKNSTGKTPVLDIGALKKIRSGKINVVPGIKRFLPGNVEFVDDRVLQIDSVVLATGYRSNVPSWLKENEFFSKDGIPRNPFPNGWKGSAGLYAVGFTRRGLSGASLDAISVSHDIAKSWKEETKQKKKSVATRHRRCISHF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1053 428 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 426 - -
Lal9g1053 428 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 15 426 - -
Lal9g1053 428 Pfam Flavin-binding monooxygenase-like 33 349 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal9g1053 428 PRINTS Pyridine nucleotide disulphide reductase class-II signature 30 52 - -
Lal9g1053 428 PRINTS Pyridine nucleotide disulphide reductase class-II signature 198 222 - -
Lal9g1053 428 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 196 367 IPR036291 -
Lal9g1053 428 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Lal9g1053 428 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Lal9g1053 428 PRINTS FAD-dependent pyridine nucleotide reductase signature 202 220 - -
Lal9g1053 428 SUPERFAMILY FAD/NAD(P)-binding domain 32 237 IPR036188 -
Lal9g1053 428 Gene3D - 30 415 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1053 Lal-Chr9 8482401 8485100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1053 K11816 - gmx:100818345 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1115 2 7984307 7986845 Lal9g1053 9 8482401 8485100 LSH
Lal11g1105 11 14762787 14765605 Lal9g1053 9 8482401 8485100 PCT
Lal20g0042 20 304744 306900 Lal9g1053 9 8482401 8485100 PCT