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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal9g1042
ATGTTTCAACTTTCTGTGTTCTTAACCACTTCAAAAGGTGACAAAGCTAGAAGCTATGAAGAACGGAAACCTCTCCATCTTGAGCCACTTTTATGCTTCAATGTTTCTCTCTTTTCAGGGATGGAGGCCATTGGTTCTGTGGATGAACTCTTGGATTTCTCATTAGACATAGGTGAGGAAGATGATGACGAGAACAAAAACAAGAAAGCCTTTCCTAAACTTGACCCAAAATGCAGTGATCCACCGTCCTTAAGCCCATTGGACCTGGATGATCCTAGCCCTCCATTTTCTGAGTTTGCAGAAGAAGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTGAGGTTGAAACATTTGTTGACTTACCCTCTATTCAACCCAACTTATCTAAGCATGAGACATGTTCAATGCTTGAATACAGCACAAGCAGTAGCAACAGTAATAACAGCCCTAACAGTATTAGCCTCTTAAGCGGTTATGATAACCTGAACGTCCCTGTCCGTCCACGGAGTAAGTCTCGCAGTCGCAGCAGGCATCTCGCTAGCAATTCTGGCATATCCTCCCAGCAATCCTGGTGGAGACAGCCAATTAATGAAAATGCCAGACCAGAAGTGATAACAATGTCAACCATTGGGAGGAAATGTCAGCACTGTGGAGCCGAAAAAACTCCGCAATGGCGTGCAGGCCCCCTTGGGCCAAAAACACTTTGTAATGCATGTGGGGTTAGATACAAGTCCGGGCGTCTTGTGCCTGAGTACCGCCCTGCAAGTAGCCCATCTTTTCGCAGTGATTTGCATTCAAATTCTCATAGGAAGGTAATGGAGATGAGGAAGCAGAAGCAAATTGGAATGACTTGA
858
0.4487
MFQLSVFLTTSKGDKARSYEERKPLHLEPLLCFNVSLFSGMEAIGSVDELLDFSLDIGEEDDDENKNKKAFPKLDPKCSDPPSLSPLDLDDPSPPFSEFAEEELEWLSNKDAFPEVETFVDLPSIQPNLSKHETCSMLEYSTSSSNSNNSPNSISLLSGYDNLNVPVRPRSKSRSRSRHLASNSGISSQQSWWRQPINENARPEVITMSTIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPSFRSDLHSNSHRKVMEMRKQKQIGMT
285
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal9g1042
285
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
211
273
-
-
Lal9g1042
285
SMART
GATA_3
209
259
IPR000679
GO:0006355|GO:0043565
Lal9g1042
285
MobiDBLite
consensus disorder prediction
61
75
-
-
Lal9g1042
285
MobiDBLite
consensus disorder prediction
140
159
-
-
Lal9g1042
285
MobiDBLite
consensus disorder prediction
165
192
-
-
Lal9g1042
285
MobiDBLite
consensus disorder prediction
59
92
-
-
Lal9g1042
285
Pfam
GATA zinc finger
215
248
IPR000679
GO:0006355|GO:0043565
Lal9g1042
285
ProSitePatterns
GATA-type zinc finger domain.
215
240
IPR000679
GO:0006355|GO:0043565
Lal9g1042
285
PANTHER
GATA TRANSCRIPTION FACTOR 1
47
281
-
-
Lal9g1042
285
CDD
ZnF_GATA
214
262
IPR000679
GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal9g1042
Lal-Chr9
8321701
8326188
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal9g1042
101
283
C2C2-Gata Transcription Factor Family
AT3G24050
47.619
8.07e-46
154
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Lal9g1042
GATA
1.1e-16
CL0167
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal9g1042
-
-
gmx:100784527
286.574
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