Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1038 ATGTCTGAAAATATCAAAGAAGAAAGAACTGTAGAAATATGTTATTATGTAGTTTTGCTGTTATTGACTTTACTTCTTTGTGGCACAGAAGGGTTGAACAGTGAGGGGCAAATCCTCTTAGAGCTTAAGAGTGGTCTTAATGATGAATTCAATCTTTTGGGAAATTGGAAATCTTCTTATGAAACACCATGTGAATGGATAGGTGTAAGTTGCATTTATGACTATCATAATAATCAAGTGGTTCAGTCTCTTAATTTGAGCTCAATGGGTCTTTCTGGAACTCTAAATGCTACTAGCATTTGTGGTCTTACCCATCTAACTTATCTCAATTTTGCTTATAATAAGTTATATGGAAATATACCCAATGAAATTGGTGAGTGCTTGAGTTTGGAGTCCCTTTATTTGAACAATAATCAATTTGATGGACCAATTCCTGCTGAATTGGGCAAGCTGTCTGTTTTGACAAGTTTGAATATATGCAATAACAAACTTTCTGGTGTTATTCCAGATGAGTTTGGCAACTTGTCTTCGTTGATCGAGTTAGTTGCATATAGTAACTTTCTCGCCGGCCCCTTGCCTAACTCGATCGGAAATCTCAAGAATCTTGTAACTTTCAGAGCTGGTGCAAATAACATTTCTGGTAGCCTGCCGAAGGAAATTAGTCGATGTAAGAGCTTGGCGTATCTCGGTCTTGCACAAAATCAGATAGGAGGGGAGCTACCAATTGAGATTGGGATGCTTAAGAGCTTAACAGAACTGATTTTATGGGATAATCAGTTGTCAGGATCTATTCCTAAAGAACTCGGCAATTGTAGTAGTCTTGAGACCCTTGCTTTATATAGTAATGAGCTTGTTGGACCGATCCCTCCGGATATTGGGAACCTCCGATCGTTGAAGTTGTTGTTTCTCTACAAGAATAATTTGAATGGAACCATTCCTAGGGAAATTGGAAATCTTTCCTCATGTTTAGAACTTGATTTCTCAGAAAACTTTTTAGTAGGTGATATCCCTTCTGAGTTCAGCAAAATAAGTGGTCTAAATTTGTTCTTTCTCTTTGAGAACCAGCTAACTGGTGTTATACCAAATGAGTTTAGCAATTTGAAGAATCTGACATTGCTAGATCTGTCAATGAATCATCTTACAGGTCCAATTCCGGTTGGCTTCCAATATTTTACTCGAATTTATCGGCTGCAACTTTTTGACAACAACCTAACTGGTATCATTCCTCAGGGACTAGGACTCCGTAGTCCTCTTTGGGTTGTCGATTTTTCCTACAACAGCTTGACAGGAAGGATACCACCTCATCTATGTCGAAATTCTTGGTTGATGTTTTTGAATCTGGCATCTAATATGCTTTATGGAAATATACCAACAGGAATATTGAACTGTGAATCATTAGCTCAGCTGCTTTTGGTTCGCAACAGGCTTACTGGTCGCTTCCCTTCAGAGTTGTGTAAATCGAACATAACCGCGATCGAGTTGAGCGAGAACAGATTCAGTGGTCCAATCCCTCTTGAGATTGGAACCTGCCAGAAATTGCAAAGACTTCACATTGCAGATAACTACTTCACAATGGAGTTGCCTAAGGAAATTGGAAATATGTCTCAATTGGTGACCTTCAATGTTTCTTCGAATCTTTTCACCGGAGGAATTCCACCTGAAATTGTTAGGTGCAGAAATCTTCAGAGGCTTGATCTAAGTCATAACAGCTTTACTGGTTCCTTGCCAAATGAACTTGGTACACTTCAGCAATTGGAGATTCTCAAGCTCTCAAACAATAAAATCTCAGGAAATGTTCCTTCAACATTAGGTAATTTGTCACATTTGAACTGGCTGCAGATGAGTGGCAATTTGTTTTCGGGTGAAATACCGCCGCAGTTGGGTTCTCTTTCGAGCTTACAGATTGAAATGGATCTCAGTTACAATAATCTTTCTGGAAGCATACCATCTCAGCTTAGCAATCTCAATATGCTTGATTATCTCTTTCTAAATAACAACCATTTAGATGGCGAAATTCCAAGCACATTTAACCTGCTTTCAAGCTTAATGGGGTGTAATTTCTCATACAATAACCTCTCTGGTCCTTTACCTTCCACCAAAATTTTCCAAAGTATGGATATAAGCAGCTTTATTGGTGGTAACAAAGGCCTCTGTGGTCCACCTCTCGGTGACTGCAACACGAATCGATCTTCTCGAGCAGCTCCTTCAATGAAGAGTGTTCATTCTCCTCTTGGTAAAATTATCATGATGGTTGCATCTACTATTTCTGGTGTTTCTCTCATCTTAATTGTGGTTATTCTCTATATTATGAGACGGTCTTCCGAGTCTGCTGCTTCCTTGAGGCACATCGAAACCAACTCTGTCGATTCCGATATCTATTTTCCTCCAAAAGAAGGTTTCACATTCCAAGATATAGTTGAAGCTACACAAAGATTTCATGAAAGTTATGTTATTGGTAAGGGAGCATGTGGAATAGTTTATAAGGCGGCGATTAAATCGGGAAAGACGATTGCTGTTAAGAAATTATCATCTAATAGGGAAGGGAACAACATTGATAATAGTTTCAGGGCAGAGATAATGACTCTGGGAAACATAAGGCATAGAAATATAGTGAAGTTGTTTGGTTTTTGCTATCACCAAGGTTCTAATCTACTACTTTATGAGTACATGGAAAAGGGTAGCTTAGGTGAACTATTGCATGGTTCTGCAAATAATGTGGAATGGCCAATTCGGTTTATGATTGCTCTTGGAGCTGCTGAAGGTCTTTCTTACTTGCATCATGGCTGCAAACCGAAGATTATTCACCGCGATATAAAATCGAATAACATTCTGCTTGATGAAAACTATGAGGCTCATGTTGGTGATTTTGGTTTGGCCAAAGTGATAGACATGCCTCAATCAAAATCAATGTCTGCAGTTGTTGGATCTTATGGTTATATTGCTCCTGAATATGCATATACTATGAAAGTCACAGAAAAATGTGACATCTATAGCTATGGTGTTGTGCTCTTGGAATTGCTAACTGGAAGAACTCCAGTTCTGCCATTGGAGCAAGGTGGAGATCTTGTCACATGGATAAGAAGCCATATCCGGAATCATAACAATAAATTGTCAATAGATATACTTGACAATCGTCTGGATCTTCAAGAACAAGGCACTGTGAATCACATGCTCACAGTTTTGAAACTTGCCTTATTGTGCACAAGTATGTCTCCTTCCGATAGGCCATCAATGCGCGAAGTCGTATCGATGCTTATTGAGTCTAATGAGCGATAA 3276 0.3889 MSENIKEERTVEICYYVVLLLLTLLLCGTEGLNSEGQILLELKSGLNDEFNLLGNWKSSYETPCEWIGVSCIYDYHNNQVVQSLNLSSMGLSGTLNATSICGLTHLTYLNFAYNKLYGNIPNEIGECLSLESLYLNNNQFDGPIPAELGKLSVLTSLNICNNKLSGVIPDEFGNLSSLIELVAYSNFLAGPLPNSIGNLKNLVTFRAGANNISGSLPKEISRCKSLAYLGLAQNQIGGELPIEIGMLKSLTELILWDNQLSGSIPKELGNCSSLETLALYSNELVGPIPPDIGNLRSLKLLFLYKNNLNGTIPREIGNLSSCLELDFSENFLVGDIPSEFSKISGLNLFFLFENQLTGVIPNEFSNLKNLTLLDLSMNHLTGPIPVGFQYFTRIYRLQLFDNNLTGIIPQGLGLRSPLWVVDFSYNSLTGRIPPHLCRNSWLMFLNLASNMLYGNIPTGILNCESLAQLLLVRNRLTGRFPSELCKSNITAIELSENRFSGPIPLEIGTCQKLQRLHIADNYFTMELPKEIGNMSQLVTFNVSSNLFTGGIPPEIVRCRNLQRLDLSHNSFTGSLPNELGTLQQLEILKLSNNKISGNVPSTLGNLSHLNWLQMSGNLFSGEIPPQLGSLSSLQIEMDLSYNNLSGSIPSQLSNLNMLDYLFLNNNHLDGEIPSTFNLLSSLMGCNFSYNNLSGPLPSTKIFQSMDISSFIGGNKGLCGPPLGDCNTNRSSRAAPSMKSVHSPLGKIIMMVASTISGVSLILIVVILYIMRRSSESAASLRHIETNSVDSDIYFPPKEGFTFQDIVEATQRFHESYVIGKGACGIVYKAAIKSGKTIAVKKLSSNREGNNIDNSFRAEIMTLGNIRHRNIVKLFGFCYHQGSNLLLYEYMEKGSLGELLHGSANNVEWPIRFMIALGAAEGLSYLHHGCKPKIIHRDIKSNNILLDENYEAHVGDFGLAKVIDMPQSKSMSAVVGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVLPLEQGGDLVTWIRSHIRNHNNKLSIDILDNRLDLQEQGTVNHMLTVLKLALLCTSMSPSDRPSMREVVSMLIESNER 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1038 1091 Gene3D Ribonuclease Inhibitor 286 395 IPR032675 -
Lal9g1038 1091 SMART LRR_typ_2 103 127 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 367 390 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 582 605 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 295 319 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 655 678 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 151 174 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 606 630 IPR003591 -
Lal9g1038 1091 SMART LRR_typ_2 247 271 IPR003591 -
Lal9g1038 1091 SUPERFAMILY L domain-like 294 406 - -
Lal9g1038 1091 SUPERFAMILY Protein kinase-like (PK-like) 789 1085 IPR011009 -
Lal9g1038 1091 SUPERFAMILY L domain-like 33 309 - -
Lal9g1038 1091 Gene3D Ribonuclease Inhibitor 194 285 IPR032675 -
Lal9g1038 1091 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Lal9g1038 1091 Gene3D Transferase(Phosphotransferase) domain 1 890 1091 - -
Lal9g1038 1091 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lal9g1038 1091 Gene3D Ribonuclease Inhibitor 412 729 IPR032675 -
Lal9g1038 1091 Gene3D Phosphorylase Kinase; domain 1 772 889 - -
Lal9g1038 1091 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 1090 - -
Lal9g1038 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 933 945 IPR008271 GO:0004672|GO:0006468
Lal9g1038 1091 Pfam Protein kinase domain 813 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1038 1091 ProSiteProfiles Protein kinase domain profile. 812 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1038 1091 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1090 - -
Lal9g1038 1091 SMART serkin_6 812 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1038 1091 Pfam Leucine rich repeat 559 618 IPR001611 GO:0005515
Lal9g1038 1091 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515
Lal9g1038 1091 SUPERFAMILY L domain-like 397 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1038 Lal-Chr9 8292487 8298013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1038 32 1087 Receptor kinase-like Gene Family AT5G56040 38.037 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal9g1038 Pkinase 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1038 - - gmx:100805792 1660.58