Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1027 ATGAAGGATATATATATGGATCAAATTGTGGATGTTCCTGATACACCTGATAGGTTAACTACCAGGTATGGTGATCGGAAATATGTTGGTATACCTGATGTGGATGTCATGTGCATGAATAAGAGGGATATGGGCCTTATTGCTGCTGATGAAATTAATAACTGCAGCAATTATATAACATTGTCCTCATCAGATAAATCTTGTCCTTCTCAAAATGATCCTATGTTTAGGAGAGCACAAAGAGAGAAAATTTTAGGACGTGGGACAACACACTCTAATGCACCTGAAAAGATGGATAAAGGGAAAACTGTAATCTCTAACTCTCCTTGCAAATCACCTCACCATGGGCCTGTTTCTGTTTTGCGTTTTAATGAAGAGAATGAAAAGTCTCAACAAATGAAATCAACTTTGTCACATCGTGGATCAAGAAATAGTGCAACTGGAGATATGAAAGGGGTGAAAGGAAACATTGGGAATTCTTCATTACCATTCATTTCTGATTCCTCTAATGCATATAGAAATGCCTTTAGAGGAAAGTGTAATAAAACTCTTTCAGGTCCTAATACATCTGTGGACCATGGCAAGAGCATTACTCTGTCTAGTGATTCTCAATGTCCACAAAAAATTGAAAAGCAAGTGTCTTTGAAACCTCTTCTTTCATCTTCTCCTCGAGGTAGAGGGCAAAAGAGATTGGTACGAAATGGGTGCATTTCACCGCATAATATTGCAACAAGGGCAAAACAATCAACTGGACAGAACAGTCATCAACCCATTGACATTGAACAGAGTCATGCAGGGCATTCAGTTTCTAGCAATACAATATCACCAATTAGTGTAGATGATATAGTTGCTGAAGAGAGAGGAAGTGGTAGAGTGAAAGGAAAAGGAGTAGTTATTCATCCTTCATCCCTTGGACTTAATGCTGGATCTATTCACGCAGCATGCAGGTCTGTGATCAATTGTGAAGAGGTTGGTGGTACAAGTGATGCTCCAAGGAATTCAATTAAAAACTCTGAGGGACAAGGTGTTACAAATGATGTTGAAAGAGATATTAGCAGACAAAATAGGAACAGAATGGACAGAAGAGACACTAGGGGCGGTCAAAGCAGCTATAGTGTATCTGGTTCTTTATTAGATCATGCAGGTCAGGCAACTTCACTTGCCATTCCTGAGGCAAACCACTCGTCTGGAATACATCCTACAACAGATGTACTAGCTAAAAGGCAAAGGAAACGTGGACCAACTTCAGGAAATCGTAATGGCTCGTCTTACAATTCAGAAATTATTTTCCTTGGTTCATCTGGGGAATCATCAAGATCATCTCGTAGCCGTGTCTTGAGTTCTGAGGTGGTCGAGTTGTCATCTGAACCAAGGTCCACCAACAGGATTTCCTTAGATTTATTTGACAATGACAACAATAGCTCAGATGCTCGGGCCCAACAAGTAGAAGCAGATGAGATATTGGCACGTGAACTCCAAGAACAACTGTATCGTGATGATTCTTTTGAAGGCAGAGGGATGCGGATGCCAAGGGAACCTTCAAATAGGCAGCCTCGTTCACGGACTCGTCAAAATCCTTCAAATAGGAGGAGAGCTGTGCCTCAAGTTTCTTTGGCTAGTAGAACTTCACAGTTGAGGAATCGCGCTATAAGACGGTCTGTTACACCTCACATATCAACTAGAGGAAGATACCCTCAATTTCCTCTGGATATGGACCTAGACATGAGACTCAATATATTGGAAGCATTAGAGGATGCAGTAGGGGGTCTTGGTGATATTGGAATGACTGATGATATCTTTCACGCGGGGCGTGATTTCAATGAAGAGGATTATGAAATGTTATTAGCTCTTGATGAAGGAAATCACCGTCATACTGGTGCAGCTTCCAATCAGATCAATGGCTTGCCACAGTCCACCATCCAGACTGACAACTTCACAGAGGTATGTGCTGTATGTCTCGACACCCCGGTGAAGGGAGAAACTATTCGCCACCTTCCTTGTTTGCACAAATTTCACAAAGATATGTCAAAAAGTGAATTGAAGGGTCCTGATACTGTTACTTTCTTTTGA 2070 0.4121 MKDIYMDQIVDVPDTPDRLTTRYGDRKYVGIPDVDVMCMNKRDMGLIAADEINNCSNYITLSSSDKSCPSQNDPMFRRAQREKILGRGTTHSNAPEKMDKGKTVISNSPCKSPHHGPVSVLRFNEENEKSQQMKSTLSHRGSRNSATGDMKGVKGNIGNSSLPFISDSSNAYRNAFRGKCNKTLSGPNTSVDHGKSITLSSDSQCPQKIEKQVSLKPLLSSSPRGRGQKRLVRNGCISPHNIATRAKQSTGQNSHQPIDIEQSHAGHSVSSNTISPISVDDIVAEERGSGRVKGKGVVIHPSSLGLNAGSIHAACRSVINCEEVGGTSDAPRNSIKNSEGQGVTNDVERDISRQNRNRMDRRDTRGGQSSYSVSGSLLDHAGQATSLAIPEANHSSGIHPTTDVLAKRQRKRGPTSGNRNGSSYNSEIIFLGSSGESSRSSRSRVLSSEVVELSSEPRSTNRISLDLFDNDNNSSDARAQQVEADEILARELQEQLYRDDSFEGRGMRMPREPSNRQPRSRTRQNPSNRRRAVPQVSLASRTSQLRNRAIRRSVTPHISTRGRYPQFPLDMDLDMRLNILEALEDAVGGLGDIGMTDDIFHAGRDFNEEDYEMLLALDEGNHRHTGAASNQINGLPQSTIQTDNFTEVCAVCLDTPVKGETIRHLPCLHKFHKDMSKSELKGPDTVTFF 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1027 689 MobiDBLite consensus disorder prediction 349 365 - -
Lal9g1027 689 PANTHER - 476 674 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 218 239 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 498 537 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 390 426 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 325 375 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 185 205 - -
Lal9g1027 689 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 683 IPR013083 -
Lal9g1027 689 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 476 674 - -
Lal9g1027 689 SUPERFAMILY RING/U-box 648 673 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 519 537 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 330 348 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 88 150 - -
Lal9g1027 689 MobiDBLite consensus disorder prediction 498 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1027 Lal-Chr9 8117670 8126555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1027 99 674 C3H Transcription Factor Family AT1G04790 33.280 1.85e-57 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1027 - - lang:109336293 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1100 2 7772837 7780686 Lal9g1027 9 8117670 8126555 LSH