Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0988 ATGAAGAATTCATTGTCAGAAACCAGTTTTTACATTGAGAGTGATGAAGAAGATGCAGAAAAGGAAATGCACAATGATAGGAATCATTCTGATTATTCCATTGACTCAAATGAAAACCATCCACAGAGGAAACCCAGTTCCTACAGCATGCAATGGCCTCAGAGTTACAGGCAATCCATCGATCTATACGGTAGCGTACCATCACCGAGTATCGGGTTTCTAGGAGCCCCGTCGCTATCAACAATAGGCAGTTCTTTCATTTCTACAAGCCTGATAAGGAGGCAGCACACTGCTGAAAAACTACCACCAATAAAGAAACCTCTGTTACAACCTGAAGCCGACGAACATCAGAGACGTAGTTCTTACGGCTTGTTGCCTCCCCTAATATCTCGGAAGTCTTCCATTAAGAAAGATGCTTCCAAGGTTTCTCAAGAAATTGAGTTTGCTGGCCAGTGCACTTTTGGACAAGCTGTACTTAATGGCATAAATGCCCTCTGTGGTGTAGGAATCCTTTCAATTCCTTATGCTGTCAAAGAAGGTGGATGGGCTGGGATTAGCATGTTGTTAATATTTGCAGTTTTCTCATTTTATACCGGGCTGCTCTTGCGCTATTGCTTGGATAGTGAACCCGGACTCGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACCACTGGACGTGTTGCCATTTCAATAATATTATACTCAGAATTATATGCTTGTTGCATTGAGTATATAATTTTGGAGAGCGACAACTTGGCTTCATTATTTCCAGATGCACACTTAAGTTTGGGTGGAATCGAGTTGAATTCGCACACACTGTTTGCGATCATTGCCACCTTGGCTATTCTTCCTACTGTTTGGCTGCGCGATCTACGCATTCTCAGTTACATATCAGCTGGTGGAGTGATTGCATCTATAGTAGTGGTTTTTTGCTTGTTCTGGGGTGGCATTCTAGATAATGTTGCTATTCCCAGCCAAAGATCAACATTCAATCTTGCAACTTTCCCTGTTGCTATGGGTCTCTATGGTTACTGCTATTCAGGACATGCTGTGTTCCCAAACCTTTACACCGCCATGGCTAACCGAAACCAATTCCCTGCAGTGCTTTTAACATGTTTTGCTATTTGTACCACCATGTATGTTGGAGTTGCTGTTATGGGATACTTGATGTTTGGAGATGCTACACTCTCTCAGTACATACTTAACATGCCTCAGAGCTTAGTGTCCACCAAGATTGCCGTGTGGACTACGGTATGCTCATTCTAG 1272 0.4308 MKNSLSETSFYIESDEEDAEKEMHNDRNHSDYSIDSNENHPQRKPSSYSMQWPQSYRQSIDLYGSVPSPSIGFLGAPSLSTIGSSFISTSLIRRQHTAEKLPPIKKPLLQPEADEHQRRSSYGLLPPLISRKSSIKKDASKVSQEIEFAGQCTFGQAVLNGINALCGVGILSIPYAVKEGGWAGISMLLIFAVFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVAISIILYSELYACCIEYIILESDNLASLFPDAHLSLGGIELNSHTLFAIIATLAILPTVWLRDLRILSYISAGGVIASIVVVFCLFWGGILDNVAIPSQRSTFNLATFPVAMGLYGYCYSGHAVFPNLYTAMANRNQFPAVLLTCFAICTTMYVGVAVMGYLMFGDATLSQYILNMPQSLVSTKIAVWTTVCSF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0988 423 Pfam Transmembrane amino acid transporter protein 152 415 IPR013057 -
Lal9g0988 423 MobiDBLite consensus disorder prediction 1 51 - -
Lal9g0988 423 MobiDBLite consensus disorder prediction 17 38 - -
Lal9g0988 423 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 21 421 - -
Lal9g0988 423 PANTHER OS05G0424000 PROTEIN-RELATED 21 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0988 Lal-Chr9 7634564 7638533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0988 1 422 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.805 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0988 K15015 - gmx:100781123 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1079 2 7551407 7559112 Lal9g0988 9 7634564 7638533 LSH