Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0972 ATGTATAGTAGTAATAGTACTGTTACACCTTCTTCTGAATCTAGAAATTCAGAGTTTGAGATGACAATTGAAGATGAACAACAAGGAGAAGGAGCTTCATTCAAAAGCTGGGCCAAACAAACAGAAGAAAGTTATCAACTTCAGCTTGCACTCGCTCTTCGTCTCTCTTCTCACTCTTCTTCTTCTTCTTCTTCTTCTGAATTCGACTCTTCCTTTAACTCATCATCAATTTCTCCTCAGTCTCTCTCTCACCGTTTTTGGGTAAATGGTTGTTTACAATACTCTGATAGAGTTATAGATGGGTTTTACCTAATCCATGGGATGGATGCATATACATGGACTATAAGTACTGATATGCAGAATGTTGGTATGATTCCGTCATTTGAATCACTGATGTCAGTTGAACCTGGTGACGATTCGTCAATTGTAGTGGTTGCTTTTGATAAATCAAGAGATTCTGGTTTGAGAGAACTGCAAAGTCGGGTACTCGGTCTTTCGAGTAACTGGATTACTACAAAAGATGCAACTGATCAGCTTGCAAATATTGTTTATAGTAGAATGGGGGGAGGATCTTCGACTGAGGAAAATTTATGTACTGGCTGGAAGGAATGCATCCAAATTCTTAAAAGCTGCATGCATTCTGTCATTCTTCCTATTGGAAGCTTACCAGTTGGCCTTTGTGTTCATCGAGCATTGCTGTTTAAAGTATTAGCTGACTTAATCAACTTACCATGCCGCATTGCTAAGGGCTGCAAGTATTGTAGGAAGGACATAGGTGCTTCATGTATAGTGAAGTTTGGTTCTGACAGGGAGTATATTATTGATTTAGTTGGAATGCCTGGGGCATTGAGCCAACCTGATTCTTCACTGAATTCTGCATCTTCAATGCTGATTTATTCACCATTATGTCATCCGAAGTTCAAGCCAGTCGAGACAGCTGAATATACTAAGACATTTGCCCAGTTGTATTTTTTGGACAGTCAAGCACTGCATCTTGTATTTGATACTACGTCAGGTGGTGCTGTTCATCATAGTGACAGAATGGATCTACACCGTACAGAAGCTTTTAGTGCAAACTATACTGGCCGGAACAACCATCTGACTGTTTTGATGGCATTATTGGATTCTCCATTTGATACACCATCTTATGTAGGTCCTACTATAGAGGATTATGCATCTTTCAATGAAGCAAACCAGTTGGTAACGGATTATCCAAGTCATGAAGTTGACCTTGACGAGGAGGATCTAGACATTCGATGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGATCATTTGGAACTGTCCTTCGTGCTGATTGGCGTGGTTCAGAAGTTGCTGTGAAGATTCTTAAGGTGCAAGGTTTTGATGCTGAACGATTTGAAGAATTTAAAAAGGAGGTGTGCCTCGATGCTGTTGTGAATAACTTATACGTCTCACTCATGAAGCGCTTACGGCATCCAAACATTGTTCTTTTAATGGGTGCAGTTATTCAACCCCCGAAGTTATCCATAGTAACAGAATATTTATCAAGAGGCAGCTTGTATGAACTTCTGCAGATTCAAGGCATTGGATCATCACTTAATGAGAGGTGTCGCTTAAGAATGGCCTATGATGTGGCAAGTGGAATGAATTATCTTCATCAAATGAGACCTCCCATTGTTCATAGAGATTTAAAGTCTCCAAATCTCCTGGTGGATGATACATACACCGTGAAGGTTTGTGACTTTGGCCTTTCACGTACAAAGGCAAATACTTATCTTTCATCTAAAACAGCAGCAGGGACTCCTGAATGGATGGCACCAGAAGTCATCCGAGGGGAACCATCGAATGAAAAAGCTGATGTATTCAGCTTTGGTGTGATATTGTGGGAATTAGTAACCCTGCAACAACCTTGGAGACAATTTAACTCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTTGAAATTCCAAGTCATGCAAATCCTCGAGTGGCTGCCTTGATCGAGCTCTGTTGGGATACGACCTTTGCTCAAGAACTAGGTGTTGCTGTTTAA 2052 0.4069 MYSSNSTVTPSSESRNSEFEMTIEDEQQGEGASFKSWAKQTEESYQLQLALALRLSSHSSSSSSSSEFDSSFNSSSISPQSLSHRFWVNGCLQYSDRVIDGFYLIHGMDAYTWTISTDMQNVGMIPSFESLMSVEPGDDSSIVVVAFDKSRDSGLRELQSRVLGLSSNWITTKDATDQLANIVYSRMGGGSSTEENLCTGWKECIQILKSCMHSVILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDIGASCIVKFGSDREYIIDLVGMPGALSQPDSSLNSASSMLIYSPLCHPKFKPVETAEYTKTFAQLYFLDSQALHLVFDTTSGGAVHHSDRMDLHRTEAFSANYTGRNNHLTVLMALLDSPFDTPSYVGPTIEDYASFNEANQLVTDYPSHEVDLDEEDLDIRWSELILKENIGTGSFGTVLRADWRGSEVAVKILKVQGFDAERFEEFKKEVCLDAVVNNLYVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLQIQGIGSSLNERCRLRMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDTYTVKVCDFGLSRTKANTYLSSKTAAGTPEWMAPEVIRGEPSNEKADVFSFGVILWELVTLQQPWRQFNSSQVVAAVGFMGKRLEIPSHANPRVAALIELCWDTTFAQELGVAV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0972 683 Pfam Protein tyrosine and serine/threonine kinase 424 675 IPR001245 GO:0004672|GO:0006468
Lal9g0972 683 Gene3D Transferase(Phosphotransferase) domain 1 513 679 - -
Lal9g0972 683 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 674 - -
Lal9g0972 683 MobiDBLite consensus disorder prediction 1 37 - -
Lal9g0972 683 Pfam Ethylene-responsive protein kinase Le-CTR1 80 283 - -
Lal9g0972 683 SUPERFAMILY Protein kinase-like (PK-like) 407 673 IPR011009 -
Lal9g0972 683 MobiDBLite consensus disorder prediction 1 17 - -
Lal9g0972 683 Gene3D Phosphorylase Kinase; domain 1 416 512 - -
Lal9g0972 683 ProSiteProfiles Protein kinase domain profile. 423 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0972 683 CDD STKc_MAP3K-like 429 673 - -
Lal9g0972 683 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 26 674 - -
Lal9g0972 683 ProSitePatterns Protein kinases ATP-binding region signature. 429 450 IPR017441 GO:0005524
Lal9g0972 683 SMART serkin_6 423 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0972 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Lal9g0972 683 PRINTS Tyrosine kinase catalytic domain signature 508 521 IPR001245 GO:0004672|GO:0006468
Lal9g0972 683 PRINTS Tyrosine kinase catalytic domain signature 549 567 IPR001245 GO:0004672|GO:0006468
Lal9g0972 683 PRINTS Tyrosine kinase catalytic domain signature 596 606 IPR001245 GO:0004672|GO:0006468
Lal9g0972 683 PRINTS Tyrosine kinase catalytic domain signature 615 637 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0972 Lal-Chr9 7484383 7496282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0972 37 671 MAP Kinase Kinase Kinase AT5G03730 56.636 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal9g0972 PK_Tyr_Ser-Thr 1.2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0972 K14510 - gmx:100807496 1019.99