Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0970 ATGTTGGCAATGGAGAAGGATTTTGAGTCAAAGTTGAAGATTCAAGGGAATTCCTCTAATGGTGGTAGTGGTGGTGGGAGTGTGCAGAGATCTAAAAGTTTTGCCTTTAGAGCTCCTCAGGAGAATTACACCATTCAGGACTTTGAGTTGGGAAGGATCTATGGTGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGATTCAGGAACTGTGTATGCAATGAAGATCATGGACAAAAAGTTTATTACTAAAGAGAACAAAGCAGCTTATGTGAAGTTGGAACGTATAGTGCTTGACCAATTGGATCATCCTGGCATTGTTCGGCTATTTTTCACTTTTCAAGACACATTTTCTCTCTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAGATAATCAGGAAAGGTCGTCTATCAGAGGATGAAGCACAGTTTTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAGTTTGGGATTGATACATCGTGATATTAAGCCGGAGAACTTGTTACTTACTAGTGATGGTCATATAAAAATAGCCGATTTTGGGAGCGTGAAGCCTATGCAGGATAGCCAAATCACCGTCCTTCCAAATGCAGCCTCAGATGATAAAGCATGCACGTTTGTCGGGACAGCTGCTTATGTACCTCCAGAGGTTCTTAATTCTTCCCCAGCAACTTTTGGAAATGATCTCTGGGCACTTGGATGCACATTATACCAAATGCTTTCTGGAACCTCTCCTTTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATAATAGCCAGAGAAATTTGCATTCCAGATTACTTTTCTGAGGCAGCCAGAGACCTTATTGATCGATTATTGGATTTGGAACCCAGCAGGAGACCAGGTGCTGGACCTGATGGTTATGCTGCTTTGAAAATGCATCCCTTTTTCAAGGGAGTTGATTGGGATAACTTAAGGGCACACACCCCTCCAAAACTTGTTCTGGATTCTGGGGGTCAATCACCTGAGGTTGATTATGTTCATGATTCATCGTATAATCCTTCTCACATCGGGGATGGATCGGCTAGACAACCTGATGGTGTTGCGACGTCTTCCGAGGGGACTGGTAGCATTACAAGGCTAGCTTCGATTGATTCTTTCGATTCAAAATGGCAACAATTTTTGGATCCCGGGGAATCCGTTCTTATGATCTCGATGGTAAAGAAATTACAGAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCGAAGTTGATCTATGTGGACCCATCGAAGCTAATCGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGACCTGAGTATCCAAGTCACAAATCCTTCACATTTCAAGATTTGCACACCAAAAAAGGTAATGTCATTTGAGGATGCAAAGCAAAGAGCCTTGCTGTGGAAAAATACAATTGAAGGTCTTCAAAACCATTAG 1473 0.4162 MLAMEKDFESKLKIQGNSSNGGSGGGSVQRSKSFAFRAPQENYTIQDFELGRIYGVGSYSKVVRAKKKDSGTVYAMKIMDKKFITKENKAAYVKLERIVLDQLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQIIRKGRLSEDEAQFYAAEVVDALEYIHSLGLIHRDIKPENLLLTSDGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREICIPDYFSEAARDLIDRLLDLEPSRRPGAGPDGYAALKMHPFFKGVDWDNLRAHTPPKLVLDSGGQSPEVDYVHDSSYNPSHIGDGSARQPDGVATSSEGTGSITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTNPSHFKICTPKKVMSFEDAKQRALLWKNTIEGLQNH 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0970 490 SMART serkin_6 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0970 490 CDD STKc_PDK1 46 315 IPR039046 GO:0004674
Lal9g0970 490 Pfam Protein kinase domain 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0970 490 MobiDBLite consensus disorder prediction 353 372 - -
Lal9g0970 490 Gene3D Phosphorylase Kinase; domain 1 46 131 - -
Lal9g0970 490 Gene3D - 368 490 IPR011993 -
Lal9g0970 490 PANTHER BNAC09G50620D PROTEIN 20 485 - -
Lal9g0970 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lal9g0970 490 SUPERFAMILY PH domain-like 309 489 - -
Lal9g0970 490 ProSiteProfiles Protein kinase domain profile. 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0970 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 485 - -
Lal9g0970 490 Pfam PH domain 387 489 IPR033931 -
Lal9g0970 490 SUPERFAMILY Protein kinase-like (PK-like) 45 354 IPR011009 -
Lal9g0970 490 Gene3D Transferase(Phosphotransferase) domain 1 132 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0970 Lal-Chr9 7457278 7464112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0970 1 490 AGC Kinase Gene Family AT3G10540 81.911 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Lal9g0970 Pkinase 7.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0970 K06276 - gmx:100801891 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0970 9 7457278 7464112 Lal9g0970 9 7457278 7464112 ECH