Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0945 ATGCAACACAAATTGAAAACCACATATCCACCAACACTAACATCAAATCCAATTCCTACTATGTTCTTCAATTCTCACCCCCCTTACTCCTCTTCACCCCCTTGTTCCCATTCTCCTCAACCTTTCACTTCGCGGTCACGATCTCCTCCCTCGGCTACTCCTCCTCCTCCACCAGTAGTGGTTGTAAGCCCATGTGCAGCCTGCAAGATCCTTCGCCGCCGCTGCATTGAGAAATGTGTCTTGGCTCCTTATTTCCCTCCCAATGATCCAATCAAGTTCATTATTGCTCATAGAGTATTTGGAGCTAGCAACATCATCAAGTTCTTGCAGGAACTACGAGAGTGTGAGAGAGAAGATGCTGTGAGCAGCATGGTGTATGAAGCAAATGCTAGGATTAGAGACCCAATATATGGTTGTGCAGGTGCCATATGCCAACTTCAAAACCAAGTTAATGAGCTACAAGCACAATTAGCCAAAGCACAAGCTGAGATAATCAACATGCATTTCCAACATACTAATTTAGTTGCACTAATATGCATGGAGATGAGTGAGTCTCAGGGAAAACAATTTCTTCAGTCTCAGAAACACTTTGATATGAGTTCCTTCTTAGATGAAAATAGTTTGGGCTGTTCTTGGGAACCTCTTTGGACATGA 654 0.4358 MQHKLKTTYPPTLTSNPIPTMFFNSHPPYSSSPPCSHSPQPFTSRSRSPPSATPPPPPVVVVSPCAACKILRRRCIEKCVLAPYFPPNDPIKFIIAHRVFGASNIIKFLQELRECEREDAVSSMVYEANARIRDPIYGCAGAICQLQNQVNELQAQLAKAQAEIINMHFQHTNLVALICMEMSESQGKQFLQSQKHFDMSSFLDENSLGCSWEPLWT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0945 217 Coils Coil 143 170 - -
Lal9g0945 217 ProSiteProfiles LOB domain profile. 63 164 IPR004883 -
Lal9g0945 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 47 205 - -
Lal9g0945 217 MobiDBLite consensus disorder prediction 31 57 - -
Lal9g0945 217 Pfam Lateral organ boundaries (LOB) domain 64 161 IPR004883 -
Lal9g0945 217 MobiDBLite consensus disorder prediction 31 47 - -
Lal9g0945 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0945 Lal-Chr9 7260123 7262335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0945 60 217 AS2 family AT1G07900 64.596 6.32e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal9g0945 LOB 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0945 - - lang:109337699 277.715