Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0941 ATGGGGAAAAAAGGTAGTTGGTTTTCTGCAGTGAAGAAAGCTTTTAGTTCAGAATCCAGAAAAGATAAGAAAAGCCATAAGTCAAAGAAAAAATCTAGTGGGCTTCACAAAGATTCAGAACCTGCATCTGAAGTAGCACCAGTTGCTGTTGCTCCCTCTCTTCCACCAATACAAGATGTTAAATTGGCCGAGGCGGAGAATGAACAGAGCAGGCATGCTTATTCTTTGGCCCTTGCCACAGCTGTTGCAGCAGGAGCTGCTGTTGCTGCTGCTCAGGCCGCTGCGGAGGTTGTTCGTCTCACAAGTATGCCTCATTACCATGGAAAGACTAAGGAAGAAATTGCAGCTATCAAGATTCAGACCGCGTTCCGTGGATATATGTCGAGAAGGGCGCTGCGTGCTTTGAAAGGTTTGGTGAGATTGAAAACAATGATACAAGGGCAATCAGTTAAACAGCAAGCAACTAACACCTTACGGTGCATGCAAACTCTTGCAAGACTTCAATATCAGATCCGCGAAAGGAGAATTAAAATGTCTGAGGAAAACCGGGTTCTTCTGAGGCAACTACAGCAGAAACACGAAAAGGAACTTCAGAAGTTGCAAGCTGCTGTTGAAGAAGAATGGGATGATAGCTTTCAAACAAAAGTTCAAATTGAAGCAAAATTGTTGCACAAGCAAGAAGCTGCTTTGAGAAGAGAGAGAGCTCTGGCCTATGCATTCTCACATCAGCAAATGGGTAAGAACTCTTCAAAACCAGTAAATCTCACATTTATGGATCCGAACAATACTCATTGGGGATGGACTTGGCTAGAGCGATGGATGGCAGCCCGTAGTACTATTGATACAAACGATTGTGCACCGATAAAGAGTGCAGCAAGTCATGTGAGCAAGGCTTCCCGTGCTGGCCGAAAAGGAAGCCAATCTGGAAGTCACAATTCCCCTTCAACTCCAGCTTCAAGGGCCCCATCTTTGTCATCCATTAACGGAAAGGCAATGCCATCATGCTCAAAGGGTAGTAGTGGCCGGGGCGATGAAGACTCGAGAAGCATGTTTAGCGTCCAGTCAGAACGCTATCGCAGGCATAGCATTGCTGGATCATCAGTGAGAGATGATGAGAGCCTTGCAAGCTCACCAGCCTTTCCAAGTTACATGGCCCCGACGAGTTCGACAATGGCCAGAACAAGAACGCATAGACCATCACTACTTAGTATGGAGAAAAATGGAACACCTGATAAAGTAGCTGCTGCTATTTCAGCAAAGAAGCGCCTTTCTTTCCCTGCTTCTCCAATTGCCTCAAGAAGACACTCTGGTCCTCCTAAGGTGGAAATGTTCCAATAA 1338 0.4574 MGKKGSWFSAVKKAFSSESRKDKKSHKSKKKSSGLHKDSEPASEVAPVAVAPSLPPIQDVKLAEAENEQSRHAYSLALATAVAAGAAVAAAQAAAEVVRLTSMPHYHGKTKEEIAAIKIQTAFRGYMSRRALRALKGLVRLKTMIQGQSVKQQATNTLRCMQTLARLQYQIRERRIKMSEENRVLLRQLQQKHEKELQKLQAAVEEEWDDSFQTKVQIEAKLLHKQEAALRRERALAYAFSHQQMGKNSSKPVNLTFMDPNNTHWGWTWLERWMAARSTIDTNDCAPIKSAASHVSKASRAGRKGSQSGSHNSPSTPASRAPSLSSINGKAMPSCSKGSSGRGDEDSRSMFSVQSERYRRHSIAGSSVRDDESLASSPAFPSYMAPTSSTMARTRTHRPSLLSMEKNGTPDKVAAAISAKKRLSFPASPIASRRHSGPPKVEMFQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0941 445 MobiDBLite consensus disorder prediction 424 445 - -
Lal9g0941 445 MobiDBLite consensus disorder prediction 300 335 - -
Lal9g0941 445 MobiDBLite consensus disorder prediction 291 409 - -
Lal9g0941 445 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lal9g0941 445 PANTHER IQ-DOMAIN 5-RELATED 1 442 - -
Lal9g0941 445 Coils Coil 183 206 - -
Lal9g0941 445 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Lal9g0941 445 MobiDBLite consensus disorder prediction 380 403 - -
Lal9g0941 445 MobiDBLite consensus disorder prediction 14 48 - -
Lal9g0941 445 MobiDBLite consensus disorder prediction 341 355 - -
Lal9g0941 445 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 442 - -
Lal9g0941 445 SMART iq_5 111 133 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0941 Lal-Chr9 7229422 7234574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0941 1 442 IQD Protein Family AT5G03040 46.983 6.47e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0941 - - lja:Lj0g3v0301539.1 520.39