Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0918 ATGTTTGGGGCTATGGATTCTATGGATAGGGTATCAGAAATTTGCTTAGATTCTCAATTATGGCATGCCTGTGCTGGTTCCATGGTTCAAATACCACAGCTCAATTCAGAAGTGTTCTACTTTCCTCAGGGTCATGCAGAACATGCCATTGGTAAAGTAGATTTTGGGAACACACCAATTCCACCACTCATCCCTTGTAGGGTTAATGGCATCAAATTCATGGCAGAATTTGACACTGATGAGGTTTATGTGAAGTTGAGGTTGACCCCTTTGAGAGAAAATGATTTTGATTTGGAAGATGATTATTGCATAGGGATTAGAGGGGTTGTTGAGAGTAAAGAGAAACCAGTTTCGTTTACCAAGACATTGACTCAATCTGATGCCAACAATGGTGGAGGGTTTTCGGTGCCTCGTTATTGCGCCGAGACCATCTTCCCAGAGTTGGATTACTCTACTGTTGAGCCTCCTGTTCAGACCATTATTGCCAGGGATGTGCATGGACAGCGCTGGAAGTTTCGGCATATCTATCGCGGGACACCAAAGAGGCATCTTTTGACCACCGGATGGAGCAATTTCGTGAACCACAAGAAGCTTGTCGCAGGGGATTCTGTCCTGTTTTTAAGGGCTGAGAATGGTGATATTTGTGTTGGGATAAGGAGGGCTAAGAAAGGGATTGGTGGAGGGAGTGAGTTATCATCATCTTGTTGGAACACCAACCAATTAGGACCTTTACTATTTGATGGGGGAAATGAAAACAACAAAATGTTGAATAGGAGAAAAGTTGGTGAAAATTTGATGGGAAAAGTGGCAGCTGAATCTGTTATTGAAGCTGTGAATTGTGCTGTTAATGGAAGGCCCTTTGAGGTTGTTTATTATCCAAGGGCTAACACACCCGAGTTTTACGTTAAGGCCTCTGCTGTTAGGGCTGCAATGCAAATACAATGGTGTTCTGGGATGAGATTCAAGATGCCCTTTGAAACTGAGGATTCTTATAGGAAAGGCTGGTTTATAGGAACCGTAACTTCTGTCCAGGTTGTTGATCCCATTCGTTGGCCTAGTTCGCCATGGCGGTTTCTACAGGTGGTGTGGGATGAACCACATTTACTCCAAAATGTTAAGTGTGTAAACCCTTGGTTGGTTGAAGTAGTCTCAAACATCCCCAATTTCCATTTCTCCCCATTCTCACCAACAAGCAAGAAACCGAGGTTTCCGATCTCGTCATTTTCCAACAATCTTCTCAATCATACTAACTCTGTGTGTAACATTCAAGGCAATAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATATGGACTATCTCGATCCAATTTCCTCGTCAACACGCCGCAACATCATAGGCCTCCTTGGGACACCTACAAGAGCGGTACTAAGAATAATGTTGATATATCATGCTTGTTGACTGTGGGAAATACAGCCCCGGAAGCCATTAAATTGAAATCGTCTCATATCTTGTTGTTCGGACAACTCATACACACTGAACAGGAGCATAATTCTAACATCTTCTCTGCTGAAAGAAATGGCAATAGTTCAACTGAAGCTACTTTGCATAAGACTTCAATTGCTTCTGAAGGATTGGCTTCAACTTCACTTCAAAATAGTCATATAGAGAATTCTTCTGATGGAGGGTCTCAGTGGTACAAAGATCTGCAGAAATCTGATCTTCGAACCGAAAACGTTAACCGATTGTGTTTGGCATTGTGA 1725 0.4296 MFGAMDSMDRVSEICLDSQLWHACAGSMVQIPQLNSEVFYFPQGHAEHAIGKVDFGNTPIPPLIPCRVNGIKFMAEFDTDEVYVKLRLTPLRENDFDLEDDYCIGIRGVVESKEKPVSFTKTLTQSDANNGGGFSVPRYCAETIFPELDYSTVEPPVQTIIARDVHGQRWKFRHIYRGTPKRHLLTTGWSNFVNHKKLVAGDSVLFLRAENGDICVGIRRAKKGIGGGSELSSSCWNTNQLGPLLFDGGNENNKMLNRRKVGENLMGKVAAESVIEAVNCAVNGRPFEVVYYPRANTPEFYVKASAVRAAMQIQWCSGMRFKMPFETEDSYRKGWFIGTVTSVQVVDPIRWPSSPWRFLQVVWDEPHLLQNVKCVNPWLVEVVSNIPNFHFSPFSPTSKKPRFPISSFSNNLLNHTNSVCNIQGNSSAGIQGARHAQYGLSRSNFLVNTPQHHRPPWDTYKSGTKNNVDISCLLTVGNTAPEAIKLKSSHILLFGQLIHTEQEHNSNIFSAERNGNSSTEATLHKTSIASEGLASTSLQNSHIENSSDGGSQWYKDLQKSDLRTENVNRLCLAL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0918 574 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal9g0918 574 Gene3D - 117 222 IPR015300 -
Lal9g0918 574 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 544 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal9g0918 574 Gene3D - 314 388 - -
Lal9g0918 574 SUPERFAMILY DNA-binding pseudobarrel domain 111 221 IPR015300 -
Lal9g0918 574 SMART B3_2 119 222 IPR003340 GO:0003677
Lal9g0918 574 Pfam B3 DNA binding domain 119 221 IPR003340 GO:0003677
Lal9g0918 574 ProSiteProfiles B3 DNA-binding domain profile. 119 222 IPR003340 GO:0003677
Lal9g0918 574 PANTHER AUXIN RESPONSE FACTOR 16 10 544 - -
Lal9g0918 574 CDD B3_DNA 118 220 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0918 Lal-Chr9 6931039 6933910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0918 1 564 B3 DNA Binding Superfamily AT4G30080 51.765 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal9g0918 B3 1.4e-20 CL0405