Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0914 ATGGGTTCCATAGAGAAAAGAGAGGCGAAAATCCCAACCAAAGAAGAAGATGACAAAGCATGCATCCATGCAATGGTATTATCAAGTTTCCAAGTGTTTCCTTCAGTTCTAAATGCTGCTATTGATCTGAATCTATTTGAAATCATTTCAGAATCAGCACCATTAGGTGCATATGTGTCAGTTTCTGACATTGCTTCTAAAATTCCAACACAACATCATGAATTGGACAAAAGGGTAGACAGAATGCTACGTGTTCTTGCCACTTTCTCACTTCTGAATTCAACTACTTACACAAACAAAGAGGGCATGGTTGAGAGGTTTTATAGTCTCTCACTTACTGGCAAATATTTTCTCACAAATCAGACTGAGAATCTTGCTTCTTTCACAAATTTGACTAGCCATCCATCTCAAGTAAAGGTTTGGCTAAATATGAAGGATGCAATTCTTGATGGAGGAATAGACCTATTCAAGAAGGTTCATGGAATAACTATGTGGGAAAACATGGAGAAAGACACACAATTGAGTCACACTTTCAACAAGGCAATGACAGGAATGTCAGCAGTACAGATGAGGAAATACTTGGAAGTATATGATGGATTTCAAGGAATTTCAACATTAGTTGATGTTGGAGGAAGTACTGGACAGTGTCTCAAAATGATACTCTCCAAGTACCCTAATATTAAGGGTATTAACTTTGATTTACCCCAAGTAATACAACATGCCCCTCCCTATCCAGGAATTGAGCATGTTGGAGGAAACATGCATGAAAGTGTTCCAAGTGGTGATGCAATAATGATAAAGGCTACTTGTCATAATTGGTCAGATGAGACATGTATAACAATATTGAAAAATTGTTATAAAGCACTTCCAGAAAATGGAAAAGTGATTATATTGGACATGATAATGCCTGAAGAAATAGATTCAAGTGATGCCACTAAGTATGTGTCTATAATTGATAACACCATGTTTATTCTAGCTGGAGGGAAGGAAAGAACAGAGAAAGAATTTGAGAAGCTATGCAAGGACTCTGGATTTTCAAGATTTGTGGTTGTTTGTCTTGCCCTCTCTGTTTTTGGAGTCATAGAATTTTATAAATAA 1098 0.367 MGSIEKREAKIPTKEEDDKACIHAMVLSSFQVFPSVLNAAIDLNLFEIISESAPLGAYVSVSDIASKIPTQHHELDKRVDRMLRVLATFSLLNSTTYTNKEGMVERFYSLSLTGKYFLTNQTENLASFTNLTSHPSQVKVWLNMKDAILDGGIDLFKKVHGITMWENMEKDTQLSHTFNKAMTGMSAVQMRKYLEVYDGFQGISTLVDVGGSTGQCLKMILSKYPNIKGINFDLPQVIQHAPPYPGIEHVGGNMHESVPSGDAIMIKATCHNWSDETCITILKNCYKALPENGKVIILDMIMPEEIDSSDATKYVSIIDNTMFILAGGKERTEKEFEKLCKDSGFSRFVVVCLALSVFGVIEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0914 365 CDD AdoMet_MTases 205 297 - -
Lal9g0914 365 PANTHER O-METHYLTRANSFERASE 7 365 IPR016461 GO:0008168
Lal9g0914 365 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Lal9g0914 365 Gene3D Vaccinia Virus protein VP39 118 365 IPR029063 -
Lal9g0914 365 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 7 365 - -
Lal9g0914 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 121 IPR036390 -
Lal9g0914 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Lal9g0914 365 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Lal9g0914 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 365 IPR016461 GO:0008168
Lal9g0914 365 Gene3D - 2 117 IPR036388 -
Lal9g0914 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0914 Lal-Chr9 6884377 6887308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0914 1 365 Monolignol Biosynthesis Gene Families AT5G54160 46.322 3.58e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0914 - - ag:AAB48059 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0914 9 6884377 6887308 Lal9g0914 9 6884377 6887308 ECH