Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0912 ATGGGAAGGTATGAGTACACAACCACCACATCTTTCCTTAGTATAATGTTTTTGTTTTGTTTATGTCCCATGGTATTATCTATGCTATCTCAAAACCAAACAAACACAATGATCACACTCTCTCAGATTCTTAATGGTTCTGTTCCAATATGGAATAGCATCAAGGAACCAAATCCATGTTTATGGAAGGGAGTTACTTGTGACACTAGTGGTTCTTCTGTGATCATGATTACTCTATCTAAGCATTCCCTCACTTCTAATAACTTCATGCATGTTCTTTGCAAAATTGAAACTTTGGAGTATCTTGATGTTTCCAACAACCAAATCACTTCAATCCCAGATGGGTTCTTAACTGAATGTGGAAAGAATAAAGGGTTGAAGTTGCTGAATTTTACTAGAAACAACTTGCATGGTGTTTTACCAACTTTTCATGGTTTTGATGGGTTGGAATATTTGGATATGTCTTTCAATTATTTGAGAGGGGCTATTGGTTTAGAGCTAGATGGACTTGTTAGCCTCAAGAGTTTGAATCTCAGTTTCAATTCCTTCAATGGGTCTCTTCCTTCAAACCTTGGAAAGTTGATGATTTTGGAGAAGCTTATGCTTTCTCACAATAGTTTTAGTGGAAAAATCCCTGATGAAATATTGAGTTATAAAAATTTGACTGTGATTGATCTTAGTGCAAATAATATTTCAGGGGCTATTCCTAGTAATATTGGGAAGCTATCAAAATTGGAAAGTTTGATTCTTTCCTCTAATTCTCTTGATGGTGAAATTCCAATATCACTAAGGAATATCACAACCCTTGCAAGATTTGCAGCAAATCAAAACAATTTCATGGGTGCTGTACCTATAGGGGTTACAACACATCTTACAAATTTGGATCTTAGTTATAATAAGTTAGAGTCCATTCCAGAAGACCTTTTATCTCCATCAAAATTGCAGGTTGTAGATTTGTCCACTAATATGTTGTCTGGGCCATTACCTGTAAATATTTCTTCTAGCTTAATCAGGTTGAGATTAGGGGGCAATTTTCTGAATGGAAACATTCCTTCTGATAGTTTTCGAAGAGCTAAAAATTTGACATACTTGGAGCTAGAAAACAATGACTTGACGGGAGTTATACCGGCCGGGTTGGGTTCGTGCCAGAATTTAGCATTGCTGAGCTTAGCTGAGAACCAGTTGAGTGGAGTATTGCCTGCAGAGCTTGGTAATCTGAGTCAGCTTCAAGTCTTGAAGCTTCAAATGAACAAATTTAACGGTACAATCCCCATTCAAATTGGCCAACTACAGAAGCTTTCAACACTGAATTTGAGCTGGAACTCTCTAGAAGGGTCAATTCCATCTGTGATGTCAAGCTTGAGCAGCCTTGTTTTCCTAAACTTGCAACAAAACAATCTGAATGGTTCGATACCGACATCGATTGAAAACTTAAGATTCCTTCTAGAACTCCAACTTGGGAAAAACCAACTAAGTGGTGTGATTCCAAGCATGCCTTCGAGCCTACAAATTGCCTTGAATCTTAGTAGCAACCTCTTTAGTGGACCTATTTCAAGCAGCTTTGGTGATTTGAGTACCCTAGAAATCTTGGATCTCTCAAATAACAGGTTTTCTGGTGAAGTTCCTAGAAGTCTAGGTAGCATGCCAGCTTTGACACAGATTATACTTTCAAACAATCAGCTGTCTGGTATGCTTCCAAAATTTGGCCCATATGTCCATGTTGAATCAAAAGGAAATACAAATCTGGTAAATAGTACTGGACAAGACAATACAACACCGAACATTGCTCGACGGTCTACTAAAACTGGAATTTCCGTTGTTACCGCTGTTCTCATTTCAATTGCAGCAGCTATTTTTCTCATTGCCCTTGTCGCGCTGATTATTGTATCAGTCTCGCGGCACATGTATAAGGTTAATGATGAGCATATACAGCCAAATGAAGATAGTCACCTTCCTCGGGTCATCCATAGTAATTTGTTTACTTCAAATGGGATCCATAGAGCAAAAATTGACTTCTCCAAGGCAATGGAGGCTGTTGCTGTAACATCAAATGTTACTCTGAAGACTAGGTTCTCGACTTACTATAAGGCCATCATGCCATCAGGATCAGTCTATTTTGTCAAGAAGTTGAATTGGAGTGACAAGATATTGGCAGTGGATAGCAGTAATGATAAATTAGTGATGCAGCTCGAAATGTTGGCAAAGTTGAACAATTCAAATGTCATGACTCCTTTGGCCTATGTTCTTTCCGACAACATTGCTTACGTATTATATGAATTTGTCTCAAATGGCTCACTATTTGATGTTCTTCATGGAAGCATGGCCGGATCTCTAGATTGGGCTAGTCGATATAGCATAGCTGTTGGGGTTGCTCAGGGTATTTCTTTTCTTCATGGACATGCATCTAGTTCGATACTTCTCCTCGACCTTTCAAGTAAAAGTATAATGCTGAAGTCCTTCAAGGAGCCTCTAATTGGGGATATTGAACACTACAAGGTGATTGACCCATCAAAGAGTACAGGGAATTTTTCTGCTGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAATATGCATACACAATGACAGTAACAATGGCTGGGAATGTGTACAGTTTCGGTGTCATTCTTCTTGAGTTACTGACCGGAAAACCAGCCATGACCGAGGGGACAGAATTGGTGAAGTGGGTTTTGCATCATTCAACAAACAAAGATTACATTCTTGATTTTAATGTCAAGAGAACATCACAAGCTGTCAGAAACCAGATGCATGCTGTTCTACAAATTGCTCTTGTTTGTGTTAGTACTTCCCCAGAAGCAAGACCAAAGATGAAGAGTGTGCTTAGGATGCTCCTAAATGCAAGATGA 2865 0.3881 MGRYEYTTTTSFLSIMFLFCLCPMVLSMLSQNQTNTMITLSQILNGSVPIWNSIKEPNPCLWKGVTCDTSGSSVIMITLSKHSLTSNNFMHVLCKIETLEYLDVSNNQITSIPDGFLTECGKNKGLKLLNFTRNNLHGVLPTFHGFDGLEYLDMSFNYLRGAIGLELDGLVSLKSLNLSFNSFNGSLPSNLGKLMILEKLMLSHNSFSGKIPDEILSYKNLTVIDLSANNISGAIPSNIGKLSKLESLILSSNSLDGEIPISLRNITTLARFAANQNNFMGAVPIGVTTHLTNLDLSYNKLESIPEDLLSPSKLQVVDLSTNMLSGPLPVNISSSLIRLRLGGNFLNGNIPSDSFRRAKNLTYLELENNDLTGVIPAGLGSCQNLALLSLAENQLSGVLPAELGNLSQLQVLKLQMNKFNGTIPIQIGQLQKLSTLNLSWNSLEGSIPSVMSSLSSLVFLNLQQNNLNGSIPTSIENLRFLLELQLGKNQLSGVIPSMPSSLQIALNLSSNLFSGPISSSFGDLSTLEILDLSNNRFSGEVPRSLGSMPALTQIILSNNQLSGMLPKFGPYVHVESKGNTNLVNSTGQDNTTPNIARRSTKTGISVVTAVLISIAAAIFLIALVALIIVSVSRHMYKVNDEHIQPNEDSHLPRVIHSNLFTSNGIHRAKIDFSKAMEAVAVTSNVTLKTRFSTYYKAIMPSGSVYFVKKLNWSDKILAVDSSNDKLVMQLEMLAKLNNSNVMTPLAYVLSDNIAYVLYEFVSNGSLFDVLHGSMAGSLDWASRYSIAVGVAQGISFLHGHASSSILLLDLSSKSIMLKSFKEPLIGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAMTEGTELVKWVLHHSTNKDYILDFNVKRTSQAVRNQMHAVLQIALVCVSTSPEARPKMKSVLRMLLNAR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0912 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 951 - -
Lal9g0912 954 SMART LRR_typ_2 242 265 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 288 311 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 96 119 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 454 477 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 548 570 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 478 501 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 406 430 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 524 547 IPR003591 -
Lal9g0912 954 SMART LRR_typ_2 170 194 IPR003591 -
Lal9g0912 954 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Lal9g0912 954 Gene3D Ribonuclease Inhibitor 288 591 IPR032675 -
Lal9g0912 954 ProSiteProfiles Protein kinase domain profile. 680 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0912 954 SUPERFAMILY L domain-like 72 351 - -
Lal9g0912 954 SUPERFAMILY Protein kinase-like (PK-like) 691 950 IPR011009 -
Lal9g0912 954 SMART LRR_bac_2 548 568 - -
Lal9g0912 954 SMART LRR_bac_2 96 115 - -
Lal9g0912 954 SMART LRR_bac_2 524 544 - -
Lal9g0912 954 SMART LRR_bac_2 288 307 - -
Lal9g0912 954 SMART LRR_bac_2 170 190 - -
Lal9g0912 954 Gene3D Phosphorylase Kinase; domain 1 654 760 - -
Lal9g0912 954 PRINTS Leucine-rich repeat signature 291 304 - -
Lal9g0912 954 PRINTS Leucine-rich repeat signature 524 537 - -
Lal9g0912 954 Gene3D Ribonuclease Inhibitor 188 287 IPR032675 -
Lal9g0912 954 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Lal9g0912 954 Pfam Protein kinase domain 691 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0912 954 Pfam Leucine rich repeat 360 418 IPR001611 GO:0005515
Lal9g0912 954 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Lal9g0912 954 Pfam Leucine rich repeat 197 255 IPR001611 GO:0005515
Lal9g0912 954 Pfam Leucine rich repeat 506 561 IPR001611 GO:0005515
Lal9g0912 954 SUPERFAMILY L domain-like 284 566 - -
Lal9g0912 954 Gene3D Transferase(Phosphotransferase) domain 1 761 954 - -
Lal9g0912 954 SMART LRR_sd22_2 242 268 - -
Lal9g0912 954 SMART LRR_sd22_2 146 167 - -
Lal9g0912 954 SMART LRR_sd22_2 96 119 - -
Lal9g0912 954 SMART LRR_sd22_2 288 310 - -
Lal9g0912 954 SMART LRR_sd22_2 218 241 - -
Lal9g0912 954 SMART LRR_sd22_2 454 480 - -
Lal9g0912 954 PANTHER F12K21.25 12 951 - -
Lal9g0912 954 ProSiteProfiles Leucine-rich repeat profile. 98 118 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0912 Lal-Chr9 6872480 6876440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0912 149 954 Receptor kinase-like Gene Family AT2G41820 38.249 5.33e-154 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal9g0912 Pkinase 2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0912 - - gmx:100796647 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0912 9 6872480 6876440 Lal9g0912 9 6872480 6876440 ECH
Lal2g1034 2 7099041 7103214 Lal9g0912 9 6872480 6876440 LSH