Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0908 ATGGCATCTCCTCCAATCAAAGATCTCACAACTTCCTCCATCAGTGATGAGAGCCAGGTACAAGCACCTAGTCCTCTCCGGAAAATGATCGCGGTGGCTTCCATCGCCGCCGGAGTTCAATTTGGGTGGGCCCTACAACTCTCTCTATTGACACCATATGTTCAGCTCTTAGGGGTGCCACACACATGGTCCTCCGTCATCTGGCTTTGTGGTCCAATCTCAGGTCTAATTGTGCAACCCATCGTTGGCTACTATAGTGACCGTTGTGAATCCCGCTTTGGTCGTCGCCGTCCTTTCATTTGTGCCGGTGCTATTTTTGTCGCCATCGCCATCATCCTCATCGGATTCGCAGCGGATTTTGGTCATAGCTTAGGAGACAACCTCAAATTGAAGACTCGCCCACGCGCCGTCGCCTTTTTTGTACTCGGATTTTGGATCCTTGACATGTCTAATAACATGCTCCAAGGACCTTGTCGTGCATTCCTCGGAGATCTCTCCGCCGGAAACCAGAGCAAGATCCGTTCAGCCAATGCCATCTTCTCGTTCTTCATGGCTGTTGGGAACATCCTCGGCTACGCTGCTGGGTCCTACGGAAAACTTTACAAGATGTTCCCATTTACTGAGACAAAGGCATGCAACATTTATTGCGCAAATCTGAAGAGTTGTTTCTTCATATCTATCATTCTCCTCACAATTCTTGTAATCTTTGTGATGATATACGTAGAAGAAATACCCTTGAAGTCATCATCAGACACTATTGATGAGAACGATGTTGGAATAATCCTATGTTTCCGATCATTATTTGGTGCCTTCAAGGAACTGAAACGCCCAATGTGGGTGTTGTTATTAGTGACTTGTTTAAACTGGATGGCGTGGTTCCCATGGGTTCTTTACGACACTGATTGGATGGGAAAGGAGGTGTATGGTGGTGAAGTTGGGCATAAGGTGTATGATATGGGTGTTCATGCAGGTTCGTTGGGTCTCATGTTCAACTCTATTGTTCTTGCTGTGATGTCTTTAGTTGTTGAGCCATTGTCACGTCTTGTTGGAGGGGTGAAGAGGTTGTGGGGTTTGGTGAACTTTATTCTAGCTATTGGTTTGGCAATGACTGTGCTCATTACTAAAGAAGCTGAGGCCCACCGCCAATTCACGGTTGTTGCACATGGTGTTAGGGAGGCTCTGCCACCGTCAACTGGTGTCAGTGTTGGTGCCTTCGCTTTGTTTTCTGTTCTCGGCATTCCTCTTGCGATTACATACAGTATGCCATTTGCTCTTGCGTCAATATTCTCCAGCACCACAGGGGCAGGCCAAGGTTTATCTTTGGGAACTCTAAATCTTGCAATTGTGATTCCACAGATGATTGTATCAGCTATAAGTGGGCCTCTAGACGGTGCATTTGGTGGTGGTAACTTGCCGGCGTTTGTGATGGGCGCCATATTTGCCGCCGTGAGTGGTGTATTGTCAATTGTGTTCTTGCCAACACCTCAGCCACAGGATTTGGCCAATGCTGCAGCACTTGGAGGGGGTTTCCACTAA 1536 0.4746 MASPPIKDLTTSSISDESQVQAPSPLRKMIAVASIAAGVQFGWALQLSLLTPYVQLLGVPHTWSSVIWLCGPISGLIVQPIVGYYSDRCESRFGRRRPFICAGAIFVAIAIILIGFAADFGHSLGDNLKLKTRPRAVAFFVLGFWILDMSNNMLQGPCRAFLGDLSAGNQSKIRSANAIFSFFMAVGNILGYAAGSYGKLYKMFPFTETKACNIYCANLKSCFFISIILLTILVIFVMIYVEEIPLKSSSDTIDENDVGIILCFRSLFGAFKELKRPMWVLLLVTCLNWMAWFPWVLYDTDWMGKEVYGGEVGHKVYDMGVHAGSLGLMFNSIVLAVMSLVVEPLSRLVGGVKRLWGLVNFILAIGLAMTVLITKEAEAHRQFTVVAHGVREALPPSTGVSVGAFALFSVLGIPLAITYSMPFALASIFSSTTGAGQGLSLGTLNLAIVIPQMIVSAISGPLDGAFGGGNLPAFVMGAIFAAVSGVLSIVFLPTPQPQDLANAAALGGGFH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0908 511 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 500 - -
Lal9g0908 511 MobiDBLite consensus disorder prediction 1 20 - -
Lal9g0908 511 Gene3D MFS general substrate transporter like domains 22 499 IPR036259 -
Lal9g0908 511 PANTHER SUGAR TRANSPORTER 15 500 - -
Lal9g0908 511 SUPERFAMILY MFS general substrate transporter 28 499 IPR036259 -
Lal9g0908 511 TIGRFAM GPH_sucrose: sucrose/H+ symporter 25 496 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lal9g0908 511 CDD MFS_SLC45_SUC 29 487 - -
Lal9g0908 511 Pfam MFS/sugar transport protein 33 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0908 Lal-Chr9 6844079 6846140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0908 10 511 Sucrose Transporter Gene Family AT1G71890 64.694 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0908 K15378 - gmx:547679 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0908 9 6844079 6846140 Lal9g0908 9 6844079 6846140 ECH
Lal9g0908 9 6844079 6846140 Lal12g0119 12 820796 824217 PCT
Lal9g0908 9 6844079 6846140 Lal24g0092 24 613319 616054 PCT