Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0896 ATGGATTTTGGTCAAGGTTATGTATCAAAAGAGCATCTTGAGCTTCATCAATCTGCAACAGAAAGTGCAGATCCATCATCTGTTTCTCCATTGCAAATTTCTACTAAGTCACCAAGATCCCTTAAATCTCCAAGGTCTTCTAAATCTCCAAGGTCCCCAAAGGTGCAAGCTAAGGGAAGCAATCTAAGTCCTAAGCATTGTAAGCTACCACATTCTCAAATAGATGGACGGCCGAAGAAAGGTGGTTCTGGTGGGAAAGGTACTTGGGGTGGATTGCTTGACACAGATGACCTGAACTCTCTTGACCCCAATGATCCAAACTATGATAGCAATGAGGACTATGACAACTCAAATGAAAAGAAAAAGAACACAGAACTGGATGATTACAAGAAAAAAGCTACAATAATAGTGGAGGAGTACTTTACCACTGATGATGTTGTTGCGACAATAAACGAAATTAGAGAACTCGGAAAACCGCTGTATGGATACTATTTTGTCAAAAAGCTTGTCTCTATCTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTATTCTGTTATCTGCAGTGTATGCTGATACATTTGAGCCTGCACAAGTTTACAAAGGATTCAGCAAATTAGTTGAATCGGCGGATGATTTGATTGTAGATATACCAGATACAGTTGATGTACTAGCACTTTTCTTAGCTAGAGCTGTGGTTGATGACATACTTCCCCCTGCATTTTTGAAGAAACATATGGCTTCCTTACCGAAAGATTCGAAAGGGGTTGAGGTATTGAAAAAAGCTGAGAAAAGCTATCTATCAGCACCTTTGCATGTGGAAATCATAGAGCGGCGCTGGGGAGGTAGTAAGAATATGACAGTTGATGATGTGAAGGTTAGGATAAACAACTTTTTGAAAGAGTATGTAGTGAGTGGTGACAAGAAGGAAGTTTTTAGATGCATCAAGGATTTGAAAGTCCCTTTTTTCCATCACGAGATAGTGAAACGTGCTCTTATAATGGCAATGGAGAGGCGTCAAGCAGAAGGTCCACTACTAGACCTGTTGAAGGAGGCAGCTGAGGAAGGTTTCATCAACTCTAGCCAGATGTCTAAAGGGTTTGGTCGGTTGATTGACACTGTTGATGACTTATCACTTGACATACCGAATGCACACGGAGTACTGCAGCAGTTAATATCCAAAGCAGCTTCTGAGGGCTGGTTGTGTGTGTCATCCTTGAAGTCATTTTCCGTCGACCCGGAAAAGGACTCAATTAAAGATAGTACTGCCAGGAATTTTAAGATAAAGACTCAGACTATTATTCAAGAGTACTTCTTATCCGGTGATATATCGGAGGTAAATAGTTGTCTAGAACAAGAGAACAGCAGCAACTGCGCCGAACTCAACGCAATCTTTGTCAAGAAACTGATAACACTGGCAATGGACAGGAAGAATAGGGAGAAGGAAATGGCTTCTGTGTTGCTTTCATCTTTGTGTTTCCCAGCTGATGATGTTGTAAGCGGCTTTGTGAAGTTGATAGAATCAGCAGATGACACTGCTCTTGATAACCCTGTTGTTGTTGAGGATCTTGCTATGTTTCTTGCTAGAGCAGTAGTGGATGAAGTCCTGGCACCACAACATCTTGTAGAGATTGGAACACAATGTTTAGGCCCGGATTCGATCGGAAGCAAAGTGCTTCAAATGGCTAAATCAACTCTAAAGGCTAGACTTTCCGGAGAGCGAATCCTGAGGTGTTGGGGTGGCGGGGGAAGCAGCAGGCCTGGTTGGGCAGTTGAGGATGTCAAGGACAAAATCGGAAAGCTTTTGGAGGAGTACGAGTCGGGAGGCGAAATAAGAGAGGCTTGTCATTGCATGAAAGAGTTAGGAATGCCATTTTTCCACCATGAAGTTGTTAAGAAAGCATTGGTAGCAATCATGGAAAAGAAGAATGAGAGATTATGGGGTCTGCTCAAGGAGTGTTTTGAAACAGGACTAATAACTATGAACCAAATGGTGAAGGGTTTTGGAAGGGTTCTAGAATCTCTTGATGATTTAGCTTTGGATGTTCCTGATGCTAAAAACCAGTTTTCACACTATGTTGAACAAGCAAAGATTCAAGGATGGTTGGATAATTCATTTTCTTTCAGCAAACAGGAACATGCAAATGCAACAGAAAATGGAACTTTCTAA 2175 0.4156 MDFGQGYVSKEHLELHQSATESADPSSVSPLQISTKSPRSLKSPRSSKSPRSPKVQAKGSNLSPKHCKLPHSQIDGRPKKGGSGGKGTWGGLLDTDDLNSLDPNDPNYDSNEDYDNSNEKKKNTELDDYKKKATIIVEEYFTTDDVVATINEIRELGKPLYGYYFVKKLVSISMDRHDKEKEMAAILLSAVYADTFEPAQVYKGFSKLVESADDLIVDIPDTVDVLALFLARAVVDDILPPAFLKKHMASLPKDSKGVEVLKKAEKSYLSAPLHVEIIERRWGGSKNMTVDDVKVRINNFLKEYVVSGDKKEVFRCIKDLKVPFFHHEIVKRALIMAMERRQAEGPLLDLLKEAAEEGFINSSQMSKGFGRLIDTVDDLSLDIPNAHGVLQQLISKAASEGWLCVSSLKSFSVDPEKDSIKDSTARNFKIKTQTIIQEYFLSGDISEVNSCLEQENSSNCAELNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPADDVVSGFVKLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLVEIGTQCLGPDSIGSKVLQMAKSTLKARLSGERILRCWGGGGSSRPGWAVEDVKDKIGKLLEEYESGGEIREACHCMKELGMPFFHHEVVKKALVAIMEKKNERLWGLLKECFETGLITMNQMVKGFGRVLESLDDLALDVPDAKNQFSHYVEQAKIQGWLDNSFSFSKQEHANATENGTF 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0896 724 ProSiteProfiles MI domain profile. 427 548 IPR003891 -
Lal9g0896 724 PANTHER PROGRAMMED CELL DEATH 4 1 715 IPR039778 GO:0045892
Lal9g0896 724 SMART ma3_7 129 240 IPR003891 -
Lal9g0896 724 SMART ma3_7 293 404 IPR003891 -
Lal9g0896 724 SMART ma3_7 596 705 IPR003891 -
Lal9g0896 724 SMART ma3_7 428 539 IPR003891 -
Lal9g0896 724 MobiDBLite consensus disorder prediction 19 59 - -
Lal9g0896 724 SUPERFAMILY ARM repeat 592 710 IPR016024 -
Lal9g0896 724 SUPERFAMILY ARM repeat 123 287 IPR016024 -
Lal9g0896 724 SUPERFAMILY ARM repeat 423 585 IPR016024 -
Lal9g0896 724 ProSiteProfiles MI domain profile. 292 413 IPR003891 -
Lal9g0896 724 MobiDBLite consensus disorder prediction 1 124 - -
Lal9g0896 724 Pfam MA3 domain 597 705 IPR003891 -
Lal9g0896 724 Pfam MA3 domain 296 403 IPR003891 -
Lal9g0896 724 Pfam MA3 domain 429 538 IPR003891 -
Lal9g0896 724 Pfam MA3 domain 130 240 IPR003891 -
Lal9g0896 724 ProSiteProfiles MI domain profile. 595 714 IPR003891 -
Lal9g0896 724 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 715 - -
Lal9g0896 724 SUPERFAMILY ARM repeat 288 409 IPR016024 -
Lal9g0896 724 Gene3D - 279 410 - -
Lal9g0896 724 Gene3D - 579 712 - -
Lal9g0896 724 ProSiteProfiles MI domain profile. 128 249 IPR003891 -
Lal9g0896 724 Gene3D - 415 571 - -
Lal9g0896 724 Gene3D - 115 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0896 Lal-Chr9 6703053 6705825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0896 587 705 Eukaryotic Initiation Factors Gene Family AT5G57870 31.967 1.17e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0896 - - lang:109352315 1223.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1023 2 6984082 6988405 Lal9g0896 9 6703053 6705825 LSH