Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0869 ATGCTGGGGGACTCAGCTGTGTTAGGAGGTGGAGGAGAGGGTGGTGGTGGTGATGCAGTAGCTTCTGCATCAGCAGTAGCAGCAGCCCATGAAGGTGGTGCTGACACGGCGGTGGGTGGCGGTGGAGGATCAATTTCAGGAGATGAGGAGAGAGGTAGAGGAGAGGAAGGTGACCGGAGCTTCGGCGGAAACAGGTGGCCAAGGCAAGAGACTCTTGCTTTGTTGAAGATACGGTCAGATATGGACGTGGCGTTTAGAGATGCAAGTGTTAAGAGTCCCTTGTGGGAAGAAATCTCAAGGAAGCTTGCAGAACTTGGGTACCACAGAAATGCAAAGAAGTGCAAAGAGAAATTTGAAAATGTTTACAAGTACCACAAGAGAACAAAAGAAGGTAGAAGTGGAAAATCAGATGGCAAAACTTATAAGTTCTTTGATCAATTACAAGCACTTGAAGTAAACCACCCTGCAATAACAATTCATCAATCTTCAACACCTTCACAAACAACAGCACCATTGCAAGTAACACCAGTTTCAATAGTGGTAACAGCTGCATCATTGTCACATACAATTCCAACCACAACAACAGTTCCAATGATTTCATCTTCTAACACCACTACTCCAAGTAGTGTTAATATTTTTCCTTTTTCACATGCCACACTCCCAATTTCAATGCCTCAACCCATTCTCAATACTACTATTACTACTACCCCATCAATAAACCTCACAATCCCTTCTTTCCCACCACCAACAAACCCTACATATATCCCACCATCATCAACACCAAACCCTACAAGCAAAACTCCTCATATTACCCCAATTTCTTTTCCAAGCATACCAATGGATCTCTTGTCCAACTATAGTTCTTCCTCAACTTCCTCTGATGAAACATTGGAAGGAAGGCGCAAGAGGAAGAGGAAATGGAAAGACTTTTTTGAGAGACTAATGAAGGAGATGATTGAGAAGCAGGAGGAGCTCCAATGGAGGTTTTTAGAAGCAATTGAGAAGCGAGAGCAAGAGCGATACTCTAGAGAAGAAGCGTGGAGGATGCAAGAGATTCAAAGGATCAATAGGGAAAGGGAAATTCTAGCACAAGAAAGATCCATGACTGCAGCAAAAGATGCAGCCGTCATGGCATTCTTGCAGAAAATAGCTGAACAACAAAATCTTGGGCAAGCATTAAATAACATCACCATTCCACAACAACATGTGCCACCGGCAACTGCGTCGGTGCCAGTACCAGCACCAATACAGGTGCAACAACAAACACCGTTCCCACGGGCTGCATCTGTGCCTGTGCCAGCAGCGCAGACAGAGATGCAACTAGTGGGATCAGTGGTGTCATTGGCTCCACAACAGCAGCCACAAGTGAACAATATGGAAATTGTAAAAGCTGATAATGGTAAGAATATGACAGGAACAAGCTCTTCCAGATGGCCAAAAGTTGAAGTTTTAGCACTGATAAGGCTGAGAACAAGCCTGGATGCTAAGTACCAAGAAAATGGACCAAAAGGACCACTATGGGAAGAGTTATCATCGTTGATGAGGAAAATTGGGTACAACAGAAGTGCCAAAAGATGTAAAGAAAAGTGGGAGAACATCAACAAGTATTTCAAGAAAGTTAAAGAAAGCAACAAGAAGAGGCCTGAAGATTCCAAAACTTGTCCATATTTTCACGAGCTAGATGCTCTATATAGAGAGAGGAACAAGCTACAGAACCCCATGAAGCACGAAAGCCTGATGGCGCCGCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAACCGCCAACAGCACCGCCGCCGAACGTGACCATGGAAGACGCACAGAATGACCCCATGGACCACCGGCACCATGAGGAGGAAGAGGAAGATGAGGATGACAAGGATATGGATGATGAAGATGAAGATGAAGATGAAGGAGCTGGTGATAACTATGAAATAGTGGCAAGCAAGCCATCTTCAGTTGGTGCATCTGCTGAATGA 1986 0.4507 MLGDSAVLGGGGEGGGGDAVASASAVAAAHEGGADTAVGGGGGSISGDEERGRGEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKSPLWEEISRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYKFFDQLQALEVNHPAITIHQSSTPSQTTAPLQVTPVSIVVTAASLSHTIPTTTTVPMISSSNTTTPSSVNIFPFSHATLPISMPQPILNTTITTTPSINLTIPSFPPPTNPTYIPPSSTPNPTSKTPHITPISFPSIPMDLLSNYSSSSTSSDETLEGRRKRKRKWKDFFERLMKEMIEKQEELQWRFLEAIEKREQERYSREEAWRMQEIQRINREREILAQERSMTAAKDAAVMAFLQKIAEQQNLGQALNNITIPQQHVPPATASVPVPAPIQVQQQTPFPRAASVPVPAAQTEMQLVGSVVSLAPQQQPQVNNMEIVKADNGKNMTGTSSSRWPKVEVLALIRLRTSLDAKYQENGPKGPLWEELSSLMRKIGYNRSAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHELDALYRERNKLQNPMKHESLMAPLMVQPEQQWPPQQPPTAPPPNVTMEDAQNDPMDHRHHEEEEEDEDDKDMDDEDEDEDEGAGDNYEIVASKPSSVGASAE 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0869 661 Pfam Myb/SANT-like DNA-binding domain 64 150 IPR044822 -
Lal9g0869 661 Pfam Myb/SANT-like DNA-binding domain 476 563 IPR044822 -
Lal9g0869 661 ProSiteProfiles Myb-like domain profile. 470 534 IPR001005 -
Lal9g0869 661 CDD GT1 64 129 - -
Lal9g0869 661 MobiDBLite consensus disorder prediction 588 661 - -
Lal9g0869 661 MobiDBLite consensus disorder prediction 247 271 - -
Lal9g0869 661 MobiDBLite consensus disorder prediction 1 65 - -
Lal9g0869 661 PANTHER - 2 652 - -
Lal9g0869 661 MobiDBLite consensus disorder prediction 589 603 - -
Lal9g0869 661 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 652 - -
Lal9g0869 661 CDD GT1 476 541 - -
Lal9g0869 661 MobiDBLite consensus disorder prediction 247 263 - -
Lal9g0869 661 MobiDBLite consensus disorder prediction 48 63 - -
Lal9g0869 661 ProSiteProfiles Myb-like domain profile. 64 122 IPR001005 -
Lal9g0869 661 MobiDBLite consensus disorder prediction 624 644 - -
Lal9g0869 661 SMART sant 474 536 IPR001005 -
Lal9g0869 661 SMART sant 62 124 IPR001005 -
Lal9g0869 661 Gene3D - 478 539 - -
Lal9g0869 661 Gene3D - 66 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0869 Lal-Chr9 6497164 6501127 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0869 62 590 Trihelix Transcription Factor Family AT1G76890 46.995 4.34e-146 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal9g0869 Myb_DNA-bind_4 6.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0869 - - lang:109354958 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0869 9 6497164 6501127 Lal9g0869 9 6497164 6501127 ECH
Lal2g0982 2 6660245 6663784 Lal9g0869 9 6497164 6501127 LSH
Lal9g0869 9 6497164 6501127 Lal12g0087 12 592010 595471 PCT
Lal9g0869 9 6497164 6501127 Lal24g0073 24 456264 459306 PCT
Lal12g0087 12 592010 595471 Lal9g0869 9 6497164 6501127 PCT
Lal24g0073 24 456264 459306 Lal9g0869 9 6497164 6501127 PCT