Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0867 ATGCTGGGGGACTCAGCTGTGTTAGGAGGTGGAGGAGAGGGTGGTGGTGGTGATGCAGTAGCTTCTGCATCAGCAGTAGCAGCAGCCCATGAAGGTGGTGCTGACACGGCGGTGGGTGGCGGTGGAGGATCAATTTCAGGAGATGAGGAGAGAGGTAGAGGAGAGGAAGGTGACCGGAGCTTCGGCGGAAACAGGTGGCCAAGGCAAGAGACTCTTGCTTTGTTGAAGATACGGTCAGATATGGACGTGGCGTTTAGAGATGCAAGTGTTAAGAGTCCCTTGTGGGAAGAAATCTCAAGGAAGCTTGCAGAACTTGGGTACCACAGAAATGCAAAGAAGTGCAAAGAGAAATTTGAAAATGTTTACAAGTACCACAAGAGAACAAAAGAAGGTAGAAGTGGAAAATCAGATGGCAAAACTTATAAGTTCTTTGATCAATTACAAGCACTTGAAGTAAACCACCCTGCAATAACAATTCATCAATCTTCAACACCTTCACAAACAACAGCACCATTGCAAGTAACACCAGTTTCAATAGTGGTAACAGCTGCATCATTGTCACATACAATTCCAACCACAACAACAGTTCCAATGATTTCATCTTCTAACACCACTACTCCAAGTAGTGTTAATATTTTTCCTTTTTCACATGCCACACTCCCAATTTCAATGCCTCAACCCATTCTCAATACTACTATTACTACTACCCCATCAATAAACCTCACAATCCCTTCTTTCCCACCACCAACAAACCCTACATATATCCCACCATCATCAACACCAAACCCTACAAGCAAAACTCCTCATATTACCCCAATTTCTTTTCCAAGCATACCAATGGATCTCTTGTCCAACTATAGTTCTTCCTCAACTTCCTCTGATGAAACATTGGAAGGAAGGCGCAAGAGGAAGAGGAAATGGAAAGACTTTTTTGAGAGACTAATGAAGGAGATGATTGAGAAGCAGGAGGAGCTCCAATGGAGGTTTTTAGAAGCAATTGAGAAGCGAGAGCAAGAGCGATACTCTAGAGAAGAAGCGTGGAGGATGCAAGAGATTCAAAGGATCAATAGGGAAAGGGAAATTCTAGCACAAGAAAGATCCATGACTGCAGCAAAAGATGCAGCCGTCATGGCATTCTTGCAGAAAATAGCTGAACAACAAAATCTTGGGCAAGCATTAAATAACATCACCATTCCACAACAACATGTGCCACCGGCAACTGCGTCACCGCCAGTACCAGCACTGCCAGCACCAATACAGGTGCAGCAACAAACACCGTTCACACAGGCTGAATCTGTGCCTATGCCAGCAGCACAGACACAGATGCAACCAGCGGGATCAGTGGTGTCATTGGCCCCACAACAGCAGCCACAAGTGAGCAATATGGAAATTGTAAAAGCTGATAATGGTGAGAATATGACAGGAACAAGCTCTTCCAGATGGCCAAAAGTTGAAGTTTTAGCACTGATAAGGCTGAGAACAAGCCTGGATGCTAAGTACCAAGAAAATGGACCAAAAGGGCCACTATGGGAAGAGATATCATCCTTGATGAGGAATAATGGGTACAACAGAAGTGCCAAAAGATGCAAAGAGAAGTGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAAGAAAGCAGCAAGAAGAGGCCTGAAGATTCGAAAACTTGTCCATATTTTCATGAGCTAGATGCTCTATATAGAGAGAGGAACAAGCTACAGAACCCCATGAAGCACGAAAGCATGATGGCGCCGCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAGCCGCCAACAGCACCGCCGCAGAACGTGACCATGGAAGACGCACAGAATGACCCCATGGACCACCGGCACCATGAGGAGGAAGATGAGGATGACAAGGATATGGATGATGAAGATGAAGATGAAGATGAAGATGAAGGAGGTGGTGATAACTATGAAATAGTGGCTAGCAAGCCATCCTGA 1974 0.4534 MLGDSAVLGGGGEGGGGDAVASASAVAAAHEGGADTAVGGGGGSISGDEERGRGEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKSPLWEEISRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYKFFDQLQALEVNHPAITIHQSSTPSQTTAPLQVTPVSIVVTAASLSHTIPTTTTVPMISSSNTTTPSSVNIFPFSHATLPISMPQPILNTTITTTPSINLTIPSFPPPTNPTYIPPSSTPNPTSKTPHITPISFPSIPMDLLSNYSSSSTSSDETLEGRRKRKRKWKDFFERLMKEMIEKQEELQWRFLEAIEKREQERYSREEAWRMQEIQRINREREILAQERSMTAAKDAAVMAFLQKIAEQQNLGQALNNITIPQQHVPPATASPPVPALPAPIQVQQQTPFTQAESVPMPAAQTQMQPAGSVVSLAPQQQPQVSNMEIVKADNGENMTGTSSSRWPKVEVLALIRLRTSLDAKYQENGPKGPLWEEISSLMRNNGYNRSAKRCKEKWENINKYFKKVKESSKKRPEDSKTCPYFHELDALYRERNKLQNPMKHESMMAPLMVQPEQQWPPQQPPTAPPQNVTMEDAQNDPMDHRHHEEEDEDDKDMDDEDEDEDEDEGGGDNYEIVASKPS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0867 657 CDD GT1 64 129 - -
Lal9g0867 657 ProSiteProfiles Myb-like domain profile. 473 537 IPR001005 -
Lal9g0867 657 MobiDBLite consensus disorder prediction 247 271 - -
Lal9g0867 657 Pfam Myb/SANT-like DNA-binding domain 64 150 IPR044822 -
Lal9g0867 657 Pfam Myb/SANT-like DNA-binding domain 479 566 IPR044822 -
Lal9g0867 657 MobiDBLite consensus disorder prediction 1 65 - -
Lal9g0867 657 MobiDBLite consensus disorder prediction 627 647 - -
Lal9g0867 657 CDD GT1 479 544 - -
Lal9g0867 657 MobiDBLite consensus disorder prediction 247 263 - -
Lal9g0867 657 MobiDBLite consensus disorder prediction 48 63 - -
Lal9g0867 657 ProSiteProfiles Myb-like domain profile. 64 122 IPR001005 -
Lal9g0867 657 Gene3D - 481 542 - -
Lal9g0867 657 Gene3D - 66 127 - -
Lal9g0867 657 MobiDBLite consensus disorder prediction 591 657 - -
Lal9g0867 657 PANTHER - 2 653 - -
Lal9g0867 657 SMART sant 62 124 IPR001005 -
Lal9g0867 657 SMART sant 477 539 IPR001005 -
Lal9g0867 657 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0867 Lal-Chr9 6437225 6441053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0867 62 593 Trihelix Transcription Factor Family AT1G76890 46.320 3.17e-143 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal9g0867 Myb_DNA-bind_4 8.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0867 - - lang:109354958 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0867 9 6437225 6441053 Lal24g0072 24 444317 453439 PCT
Lal24g0072 24 444317 453439 Lal9g0867 9 6437225 6441053 PCT