Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0861 ATGGAAGGGAATTTGTCACAGGGAGGTATAATTCAAGGTGCAACATCTTTTGGTGGTTTTGACTTGTCTGAATCAATGCAGGTTCATCCTTTAGTACATCATCCACATATCATGAACCAACATCAAACTCATCCTTGTGGTGGGTCTTTAGTGCATCCCTCAATTCATGAGGGTATTCCATTTACATTGGGAACCTTGCATAGCTGTGATCAGATTATGTCGGTGGCGGAGTTTAGCAAGGGAGATAGAAGCAAAAACTCAGCAAGTGATGAAGACGAGCCAAGCTTTAATGAGGACAGCGGTGAAGGTCATCATGAAGCGGCTGGAGGGAAAAATGGGTCCCCTTGGAAGCGGATGAAGTGGACGGATAAGATGGTGAGGCTTATGATAACAGCTGTTTCTTACATAGGTGAGGATGCAACTTGTGATGGTGGTGGAAGACGAAAATTGGCGGTCCTACAGAAAAAGGGCAAGTGGAAATCTATTTCCAAGGTCATGGCTGAAAGGGGTTATCATGTTTCACCTCAGCAATGCGAGGATAAATTCAACGATCTTAATAAAAGGTATAAAAAGCTCAATGATATGCTTGGGAGAGGAACTTCTTGTCAGGTTGTTGAAAACCCTGCGCTGCTGGATGTAATAGATTATCTTACCGACAAAGAAAAAGATGATGTTCGAAAAACATTAAGCTCAAAACACCTGTTCTACGAAGAGATGTGTTCTTACCATAATAATAATAGATTGCATTTACCCCATGATCCTGCATTGCAACGTTCTTTGCAGTTAGCTCTTAGAAATGGTGATGATCATGATAATGATGGAATCAGAAGGTCCAATCACGATGAAGATGATCAAGATTTCGAAACTGAAGGTCATGACTTTGAAGAGAATTATGCTTCCCGTGGAGATAGTAGAGGATTAGGGGGAGCTATGAAGAAATCGAAACAAGGGCAAGGCGAAGAAGGTGCCACTACTTTTGGGAATTCTTTTAATTGTCAGGAGCACAACAAAAGTTCGTATGCCCACCGAAAAATGGTCCCGACTGACATGAATCAAGCTTTACCTGAAAGCATGGGGGCAGCTTGGTTACAACAAAAGCGGTGGATTGAATCTCGCTCACTTCATTTAGAAGAACAAAAGCTACAAATTCAGGCTGCGTTGTTGGAACTAGAGAAACAAAGATACAAGTGGGAGAAGTTTAGTCACAAAAAAGACCGGCAGTTGGAGAAGATGAAATTGGAGAATGAAAGAATGAAGATTGAAAATGAATATCTTGCTTTAGAGTTGAAGCGAAAGGAAATGGAAGCTGGCTTTGATTAG 1320 0.4152 MEGNLSQGGIIQGATSFGGFDLSESMQVHPLVHHPHIMNQHQTHPCGGSLVHPSIHEGIPFTLGTLHSCDQIMSVAEFSKGDRSKNSASDEDEPSFNEDSGEGHHEAAGGKNGSPWKRMKWTDKMVRLMITAVSYIGEDATCDGGGRRKLAVLQKKGKWKSISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDYLTDKEKDDVRKTLSSKHLFYEEMCSYHNNNRLHLPHDPALQRSLQLALRNGDDHDNDGIRRSNHDEDDQDFETEGHDFEENYASRGDSRGLGGAMKKSKQGQGEEGATTFGNSFNCQEHNKSSYAHRKMVPTDMNQALPESMGAAWLQQKRWIESRSLHLEEQKLQIQAALLELEKQRYKWEKFSHKKDRQLEKMKLENERMKIENEYLALELKRKEMEAGFD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0861 439 PANTHER F16F4.11 PROTEIN-RELATED 1 438 - -
Lal9g0861 439 MobiDBLite consensus disorder prediction 83 106 - -
Lal9g0861 439 Coils Coil 401 430 - -
Lal9g0861 439 MobiDBLite consensus disorder prediction 266 285 - -
Lal9g0861 439 MobiDBLite consensus disorder prediction 266 330 - -
Lal9g0861 439 Pfam Myb/SANT-like DNA-binding domain 118 242 IPR044822 -
Lal9g0861 439 MobiDBLite consensus disorder prediction 79 116 - -
Lal9g0861 439 PANTHER FACTOR, PUTATIVE-RELATED 1 438 - -
Lal9g0861 439 Coils Coil 373 396 - -
Lal9g0861 439 Gene3D - 121 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0861 Lal-Chr9 6384814 6388393 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal9g0861 Myb_DNA-bind_4 4.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0861 - - gmx:100812134 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0861 9 6384814 6388393 Lal9g0861 9 6384814 6388393 ECH
Lal2g0981 2 6629912 6635667 Lal9g0861 9 6384814 6388393 LSH
Lal9g0861 9 6384814 6388393 Lal12g0086 12 588091 589036 PCT
Lal9g0861 9 6384814 6388393 Lal24g0071 24 438591 441682 PCT
Lal12g0086 12 588091 589036 Lal9g0861 9 6384814 6388393 PCT
Lal24g0071 24 438591 441682 Lal9g0861 9 6384814 6388393 PCT