Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0859 ATGGAGAGAGTTCTTGATTTCGTTGAAGGCGTCGGAGAGAGCTCGTCGCCGCCGCGAAGCTTCAGCGGTTTCAGTAATTACGACGTCAGGAATGATGTGTACAATCGCTTAGTTGAAATCAGTCACGATCAAGCGGTGTCGAATCCCGATTTCAAGGAACAATTGGAGGCTCACTTCAATCGCTTGCCTCCAAGTTATGGACTTGATGTCAATATTGATAGAGCTGAAGATGTTCTATTGCATCAACGTCTTCTTGATTTAGCAAAAGACCCAGAAAAGCGCCCCGTTTTCCACGTACGCTTCTTGGAGAATGTTTCTACTGGAACAGATGAAGATCGAGAAATTTTAAGCACTCATTCTAGCCCAAGGCCGTCTTTCGATGCAATTAATGGGGGAGCTGTATCATGTCATAAGAGGACAAGGGATCATGCAACTGACTATGAGGCTTGCTCAAAGCTTGAGGGCCTAAACTTGGATGTTAGAAAGAACTCCAAGGAGATAGAGGAAAAATTCCTTACTGACAACTTTTCCCAGAGGCAGGAACAATCAAGTGTCCCACTTCATGAAGTAATATTTTCCACTGTTGACAAGCCAAAGCTTTTAAGCCAGCTTTCGGCTTTGCTGTCTGATATTGGGCTTAACATCCGTGAAGCACATGTTTTTTCCACAACCGATGGTTACTCCCTTGATGTATTTGTGGTGGATGGATGGCCAGTAGAGGAAACAGATGTTTTGCATGATGCCATGGAAAAAGCCGTTGCGAGAAGTGAGGGGTCATGGTCCCGTTCTTCAAATTCCCACTTGGATGTGGAAAAGCCCATAGCATCAGAGGGAACATCTGGAGATTGGGAAATAGACAGGAGGTTATTGAAGATAGGAGAAAGAATAGCATCAGGTTCCTGTGGAGATTTGTATCATGGAGTTTATCTTGGTCAAGATGTTGCTATTAAGGTTCTGAGATGTGAGCAATTGAATGATGCTTTGGAGGATGAGTTTGCTCAAGAAGTGGCAATTTTGAGGCAGGTACATCATAAAAATGTTGTTCGCTTCATTGGGGCATGTACAAAGTCTCCACATTTGTGCATAGTGACAGAGTATATGACAGGAGGAAGTCTGTATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCGGTTACTAAAGTTTGCAATTGATGTTTGCAAGGGTATGGAGTATTTGCATAAAAACAACATAATTCATAGGGATCTGAAGACAGCCAATTTGCTGATGGACGCACACAATGTTGTTAAAGTAGCTGATTTTGGAGTTGCTCGGTTTCTAAATCAAGGGGGAGAGATGACAGCAGAAACTGGAACATATAGATGGATGGCGCCAGAGTATCTTACTGTTATCGTATTTTCTCACAAGGTTATAAACCATCAGCCATATGATCAGAAGGCAGACGTGTTCAGTTTTTCCGTAGTACTGTGGGAACTAGTGACGGCAAAGGTGCCATATGATACCATGACTCCACTACAAGCTGCCTTGGGTGTGAGACAGGGTCTGCGTCCAGAACTTCCAAAGCATGGGCATCCAAAACTATTAGATTTGATGCAAAGATGCTGGGAAGGAGTTCCAAACAACCGGCCATCCTTTCATGAGATAACAGTTGAACTTGAGAATCTTCTGCAAGAAATTGAGAGTGATTCAGATTCCCAAGCTAGAAGTGCTTGA 1701 0.4321 MERVLDFVEGVGESSSPPRSFSGFSNYDVRNDVYNRLVEISHDQAVSNPDFKEQLEAHFNRLPPSYGLDVNIDRAEDVLLHQRLLDLAKDPEKRPVFHVRFLENVSTGTDEDREILSTHSSPRPSFDAINGGAVSCHKRTRDHATDYEACSKLEGLNLDVRKNSKEIEEKFLTDNFSQRQEQSSVPLHEVIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDVLHDAMEKAVARSEGSWSRSSNSHLDVEKPIASEGTSGDWEIDRRLLKIGERIASGSCGDLYHGVYLGQDVAIKVLRCEQLNDALEDEFAQEVAILRQVHHKNVVRFIGACTKSPHLCIVTEYMTGGSLYDYLHKNHNVLELSRLLKFAIDVCKGMEYLHKNNIIHRDLKTANLLMDAHNVVKVADFGVARFLNQGGEMTAETGTYRWMAPEYLTVIVFSHKVINHQPYDQKADVFSFSVVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEGVPNNRPSFHEITVELENLLQEIESDSDSQARSA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0859 566 Gene3D Phosphorylase Kinase; domain 1 279 368 - -
Lal9g0859 566 SMART serkin_6 290 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0859 566 SUPERFAMILY Protein kinase-like (PK-like) 273 553 IPR011009 -
Lal9g0859 566 MobiDBLite consensus disorder prediction 1 22 - -
Lal9g0859 566 SUPERFAMILY ACT-like 188 256 IPR045865 -
Lal9g0859 566 ProSiteProfiles Protein kinase domain profile. 290 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0859 566 ProSiteProfiles ACT domain profile. 189 266 IPR002912 -
Lal9g0859 566 Pfam Protein tyrosine and serine/threonine kinase 290 547 IPR001245 GO:0004672|GO:0006468
Lal9g0859 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Lal9g0859 566 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 559 - -
Lal9g0859 566 PRINTS Tyrosine kinase catalytic domain signature 364 377 IPR001245 GO:0004672|GO:0006468
Lal9g0859 566 PRINTS Tyrosine kinase catalytic domain signature 401 419 IPR001245 GO:0004672|GO:0006468
Lal9g0859 566 PRINTS Tyrosine kinase catalytic domain signature 476 498 IPR001245 GO:0004672|GO:0006468
Lal9g0859 566 PRINTS Tyrosine kinase catalytic domain signature 519 541 IPR001245 GO:0004672|GO:0006468
Lal9g0859 566 CDD STKc_MAP3K-like 296 548 - -
Lal9g0859 566 Gene3D Transferase(Phosphotransferase) domain 1 369 566 - -
Lal9g0859 566 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0859 Lal-Chr9 6337832 6355573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0859 28 558 MAP Kinase Kinase Kinase AT4G35780 49.081 2.41e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal9g0859 PK_Tyr_Ser-Thr 7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0859 - - gmx:100782737 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0859 9 6337832 6355573 Lal9g0859 9 6337832 6355573 ECH