Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0827 ATGGTATCCAAAAACCCAAACTCGCCTGAGGGCTTCTACCTTGATCCGAGTGGCATGACCCGGCCGGGGCTCAACCCCTTCGCCTCCGTAACTGCCACCGCAACTCCGGTGGATTCGGCGGCGATTTTATCGGAGGACGCCGCCAAGAAGATCCGGAAGCCGTACACTATAACTAAGTCAAGGGAGAACTGGACCGAACCCGAACATGACAAGTTTCTCGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAAAAAATCGAAGCATTTGTTGGATCAAAGACAGCAATACAGATACGTAGCCATGCACAAAAATACTTTTTGAAAGTTCAGAAAAGTGGGACGAATGAACATCTTCCTCCACCCAGACCTAAGAGAAAAGCTGCCCATCCTTATCCCCAGAAAGCTTCCAAAAATGCTCCTGTACCCCCACTAGTATCAGGACCTTTTGAATCTCCACCTGCTTTGCTTGAGCCTGGATATATCCTGAAGCATGACTCCTCAGCAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCATGGTCAAACACCACCTTGCAAGCAACTAATCTATCATGTGTCCCAAAAATGAATAATTCTTGCAGCAGCGGTGAAAGCACTCTTAGAGTGCGGCCAGTTGTTCTCCCGGATTTTACTCATGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATGTAACTGGCCATTTGCAGAAACTAAACAAGATGGACCGCATAGATGTTGAGACGGTGCTACTGCTGATGAGAAACCTGTCTATCAATTTAACAAGCCCTGATTTTGAGGATCATAGGAAGCTGCTTTCATCATATGAGGTTGAACCAGAGACAAATAACTATATCAATGCTGAAAGACAACTTTCCAATGAGCAGCTTAAAAGTGTTACTTAG 912 0.4529 MVSKNPNSPEGFYLDPSGMTRPGLNPFASVTATATPVDSAAILSEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTAIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNAPVPPLVSGPFESPPALLEPGYILKHDSSAMLKTPIMNTVVPSWSNTTLQATNLSCVPKMNNSCSSGESTLRVRPVVLPDFTHVYSFIGSVFDPNVTGHLQKLNKMDRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEVEPETNNYINAERQLSNEQLKSVT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0827 303 MobiDBLite consensus disorder prediction 111 146 - -
Lal9g0827 303 CDD SANT 63 106 IPR001005 -
Lal9g0827 303 PANTHER SWI/SNF COMPLEX-RELATED 3 297 - -
Lal9g0827 303 PANTHER PROTEIN REVEILLE 6 3 297 - -
Lal9g0827 303 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
Lal9g0827 303 Pfam Myb-like DNA-binding domain 61 106 IPR001005 -
Lal9g0827 303 SUPERFAMILY Homeodomain-like 55 111 IPR009057 -
Lal9g0827 303 SMART sant 60 108 IPR001005 -
Lal9g0827 303 Gene3D - 63 111 - -
Lal9g0827 303 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lal9g0827 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lal9g0827 303 ProSiteProfiles SANT domain profile. 59 110 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0827 Lal-Chr9 6016773 6023493 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal9g0827 Myb_DNA-binding 1.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0827 - - gmx:778054 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0827 9 6016773 6023493 Lal9g0827 9 6016773 6023493 ECH