Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0824 ATGAATGGTCCCACATTCTCACATAAAAGTGTGACCTCTCTTCTTTCTCCTTTGTATATCAACTTTCACTCCAAATATTCATTCCCTCTTCACTCTAAACACTTCCTTCACATTCCTTTAGCCATGGCGGTTGGACTCTCAGCCGCCATAACCATGAAGCCCCTCCGTCTCCACCACCCCTTTTTCCATCTCCACTCCAAACCAATGCCAACAATGTTATTATTCAACCCCTTAGCCTCTTTTTCTCCCCCTTTAACCCAAAGAATTAGAAGCACCACTGTTTGTTTGGTTAAGGATCCAAAACAAAGCACTGAGATAGAAAGTGATGCAGAAAATAAGAGTACCCCACAAACACAAGTGAATTATCCACCAATCGTACCAACACATGTGGCAGAAAAATGGGCAAGAAAGAAGTCTGAAAGATCAACATATCTTGTTGCTGCAGTCTTGTCTAGTTTAGGCTTCACATCTTTGGCTGTGCTATCTGTTTATTATAGATTCTCGTGGCAAATGGAGGGTGGAGATGTTCCTTGGGCTGAAATGTTCGGTACTACTGCTCTTGCTGTGGGTGCTGCTGTGGGTATGGAATATTGGGCTAGATGGGCTCATAGGGCTCTTTGGCATGATTCCTTATGGAGCATGCATGAGTCTCATCATCGACCAAGAGATGGACCATTCGAGCTGAACGATGTTTTTGCAATAATCAACGCTGTCCCTGCTATTGCTCTTCTCTACTATGGTTTCTGGAACAAGGGATTGGTCCCTGGCCTCTGTTTTGGTGCAGGTCTTGGAATTACAGCGTTTGGGATGGCCTACATGTTTGTACACGATGGCTTGGTGCATAAGAGATTCCCTGTGGGTCCCATTGCCAATGTGCCCTACTTCAATAGGGTAGCTTCTGCTCACAGAATTCATCATTCGGACAAATTCGAAGGAGTGCCATATGGCCTATTTTTTGGACCAGAGGAACTTGAAGATGTAGGAGGGCTAGCTCAGCTGGAGAAAGAGATAAATAGGAGTTTGAAATCATTAAGTCGTTCATAA 1044 0.4425 MNGPTFSHKSVTSLLSPLYINFHSKYSFPLHSKHFLHIPLAMAVGLSAAITMKPLRLHHPFFHLHSKPMPTMLLFNPLASFSPPLTQRIRSTTVCLVKDPKQSTEIESDAENKSTPQTQVNYPPIVPTHVAEKWARKKSERSTYLVAAVLSSLGFTSLAVLSVYYRFSWQMEGGDVPWAEMFGTTALAVGAAVGMEYWARWAHRALWHDSLWSMHESHHRPRDGPFELNDVFAIINAVPAIALLYYGFWNKGLVPGLCFGAGLGITAFGMAYMFVHDGLVHKRFPVGPIANVPYFNRVASAHRIHHSDKFEGVPYGLFFGPEELEDVGGLAQLEKEINRSLKSLSRS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0824 347 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 42 343 IPR045019 GO:0016491
Lal9g0824 347 MobiDBLite consensus disorder prediction 100 122 - -
Lal9g0824 347 Pfam Fatty acid hydroxylase 191 319 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0824 Lal-Chr9 5990582 5993077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0824 42 261 Chloroplast and Mitochondria Gene Families AT4G25700 61.086 6.31e-88 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0824 K15746 - gmx:100785541 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0824 9 5990582 5993077 Lal9g0824 9 5990582 5993077 ECH
Lal2g0941 2 6322306 6325153 Lal9g0824 9 5990582 5993077 LSH
Lal9g0824 9 5990582 5993077 Lal12g0064 12 416888 418680 PCT
Lal12g0064 12 416888 418680 Lal9g0824 9 5990582 5993077 PCT