Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0820 ATGTCTTCGCCTGGCTTCACCGCCGGAGCCACCCCAGACTTTTTCTCCACCATGCCGTCATCAACCACCATCAACAATCCCACCACCACCACCACCCTCAATAACAACCACCACCACCACCACCTTCTCCCTTCTCACCCTGTCTACCGAACCCAACAACAACAACAACAACAACTCCCTGCAATTTTTCTGGATCCTTCTTCCCAGATCTCTCAGCAACGCCAAACCCCAACCCTCATGGGTAAACGCACCCTCGCTGAATTCCAAACCCACCGCAACCACAACATCCTTAACCACAACCACAACAACCTTAACAATGACCAGAACCATGTTTTCTCGAACGTTCTACTCCGCTCTGTGAAACCCAGAACAACGTTTCAACATGGTTCTACTTCTCCCTTATCTCCTATGGATTTTTCCATTCCGGAATTACAAAGCCCTAATTGGGGTTTCCAAACGCAGCGTTTTGGCATGCCCCTTCTTCAACAACTTCGTCCTCAACCCATTAACCTTTTTAACACCAACACCACCACCACCAACAACAACAATTCTATCTTCCAGAACCCAAATTTTCCGTATCGGAGCTCAAACTTGGGTCAGATTCCGAACCGGGTTCAGTTTCAAGTTCAATCCTCTGAACCGGAGAAAAAGATGATGGAAAACCGGCTTCAAGAACTAGAGAAACAGCTTCTTGAAGATAACGATGAAGAAGAAGGAGAAGCTGATACAGCGTCTGTGATCACAAGCAACGAGTGGTCAGAGACAATTCAGAACTTGATTAGTACTAATCCAACGCAGAAACCAGTTTCTTCATCTCCAACTTCGTCAACTACGTCATCAACTTCATCTTCTTGCTCTATCGTTTCACCTAGCTGTTCAAGACAAGCGCTTTTGGAAGCTGCATCTGCGATTTATGAAGGGAAGAATGAAACTGCGTCAGAGATTTTAGCCCGGTTGAGTCGGGTCGGTACAAACCCGAATGAGAATTCGGATCAGCGGTTAAACGATTACATGGTAATGGCGTTGAAATCGCGTATGAACTCGGTTGATAACCCTCCTCCGGTGGCAGAACTTTTCAGTAGGGAACACGCTGAGTCGACTCAGTTGATGTTTGAAAACTCGGTTTGTTTTAAAGTTGGGTTCATGGCTGTGAACATAGCAATACTGGAAGCGGCATTTGAAGAAGGGAACGAGAAAGGGTTCTGTGTTGTTGATTTTGATATCGGGCAAGGGAAGCAATATATGAGTCTTTTTCATATGATTTCGGCGCGTAAGTCTCAGTCGCCGACAGCGATGAAGGTGAAGATTTTGGCTTTGGAGGAGAACGGCGGAGAAGAGAGGCTTAGAGCGGTGAGTGAGATGCTGAGTCGACAGGCTGAGAGGTTGAAGATCGAGTTCGAGTTCAAAGTTATTGTGATGACTCAGAAACTCGCTGAGTTGACTCGTGAGTCACTTTGTTTGGACACGGATGAGACCGTTATTGTGAATTTTGCGTTCAAGTTGAACCGAATCCCCGACGAGAGCGTCTCCACGGAGAATCCACGCGACGAGCTTCTGAGGCGCGTGAAGGGACTCGCTCCGCGCGTGGTGACGTTGTTCGAACAGGAGATGAATAGCAACACGGCGCCGTTTTTGGCGCGTGTGGCGGAGTCGTGCTCGTATTACGGCGCGTTGTTTGACTCAATTGATGCTGTAATGGGTAAAGACAACTCGGACCGAGTCAGGGTGGAAGAGACGCTGAGCCGGAATCTGTGTAACTCGGTGGCGTGTGAGGGAAGGGACCGCGTGGAACGATGTGAGGTTTACGGTAAATGGCGCGCGCGTATGAGCATGGCGGGGTTTAAGTTGAAACCGCTGAGTCAGAACGTTGCCGAGTCAATCAAGTCTCGACTCGCCATGGTTAATAACCGTGTCAACTCGGGACTCACCGTGAAAGAAGAGAATGGTGCCATTTGTTTTGGTTGGATGGGAAGAACACTCACCGTGGCATCTGCGTGGCGTTAA 2004 0.486 MSSPGFTAGATPDFFSTMPSSTTINNPTTTTTLNNNHHHHHLLPSHPVYRTQQQQQQQLPAIFLDPSSQISQQRQTPTLMGKRTLAEFQTHRNHNILNHNHNNLNNDQNHVFSNVLLRSVKPRTTFQHGSTSPLSPMDFSIPELQSPNWGFQTQRFGMPLLQQLRPQPINLFNTNTTTTNNNNSIFQNPNFPYRSSNLGQIPNRVQFQVQSSEPEKKMMENRLQELEKQLLEDNDEEEGEADTASVITSNEWSETIQNLISTNPTQKPVSSSPTSSTTSSTSSSCSIVSPSCSRQALLEAASAIYEGKNETASEILARLSRVGTNPNENSDQRLNDYMVMALKSRMNSVDNPPPVAELFSREHAESTQLMFENSVCFKVGFMAVNIAILEAAFEEGNEKGFCVVDFDIGQGKQYMSLFHMISARKSQSPTAMKVKILALEENGGEERLRAVSEMLSRQAERLKIEFEFKVIVMTQKLAELTRESLCLDTDETVIVNFAFKLNRIPDESVSTENPRDELLRRVKGLAPRVVTLFEQEMNSNTAPFLARVAESCSYYGALFDSIDAVMGKDNSDRVRVEETLSRNLCNSVACEGRDRVERCEVYGKWRARMSMAGFKLKPLSQNVAESIKSRLAMVNNRVNSGLTVKEENGAICFGWMGRTLTVASAWR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0820 667 Coils Coil 445 465 - -
Lal9g0820 667 MobiDBLite consensus disorder prediction 1 30 - -
Lal9g0820 667 Pfam GRAS domain family 294 667 IPR005202 -
Lal9g0820 667 ProSiteProfiles GRAS family profile. 284 667 IPR005202 -
Lal9g0820 667 MobiDBLite consensus disorder prediction 260 285 - -
Lal9g0820 667 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 74 666 IPR005202 -
Lal9g0820 667 PANTHER SCARECROW-LIKE PROTEIN 8 74 666 IPR030013 -
Lal9g0820 667 Coils Coil 209 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0820 Lal-Chr9 5964422 5966425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0820 52 667 GRAS Transcription Factor Family AT5G52510 48.195 4.18e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal9g0820 GRAS 5.1e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0820 - - aip:107644872 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0820 9 5964422 5966425 Lal9g0820 9 5964422 5966425 ECH