Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0813 ATGCCTTGCGCTTCCTTCACTTCTGGCACTGGTTCTGTTATTGCTGGTGATGGTGAAAACACCAACAACAACAACAACAACAACAACAGTGACGGTTATTCCTCTATTCGTGATTTCAAGCTCAACGAATCAACGTTTTTGGCTTCACTTATGCCGAAGAAAGAGATTGGCGTTGATCGATTCCTTGAAGCTCACTCTAACTACGATGGTCGCGGTGTTCTCATCGCCATCTTCGATTCTGGTATAGATCCAGCTGCTGCTGGATTACAGGTTACTTCGGATGGTAAACCGAAAGTTCTTGATGTCATCGATTGTACTGGGAGCGGAGATGTTGATATCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATCCGCGGGGCATCAGGACAATCTTTGATTATCAATACCTCATGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTACAAATTAGTTTATGAGCTCTTTACAGAAGATTTGACTACTCGTCTGAAGAAAGAAAGAAAGAAAAAGTGGGACGAGAAAAACCAGGAAGAAATTGCTAGGGCTGTAAAACAACTCGATGATTTTGATCAGCAAAATGTCAAAGTGGATGCTGCAAAACTTAAAAGGGAACGTGAAGATCTCCAGAATAGGATTGAGCTTCTGAGAAGGCAATCTGAGAGTTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTTTGGCATGATGGAGAGGTCTGGAGAGTTGCTCTTGACACACAGAGTCTTGAGGATGATCCAGATTATGGGAAGCTTGCTAACTTTGTGCCCTTAACTAATTATAGGATTGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGCACCTTTGTTGTTAATGTCTATAATGATGGGAATGTCTTAAGTATTGTAACAGACTGCTCTCCCCATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCTCTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCATGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTTTGATTAGGGCACTGATAGCTGCCGTGCAGCATAAATGCGACCTTATCAACATGAGTTATGGCGAAGCAACATTATTGCCAGACTATGGACGCTTTGTTGACCTTGCCAATGAGGTGGTGAACAAGCACCGCGTGACATTTGTGAGCAGTGCTGGTAACAGTGGACCAGGACTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCAAGTATCATAGGTATTGGTGCATATGTTTCTCCTGCTATGGCTGCCGGTGCGCATTCTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTTAGTGTAAGCGCCCCTGGAGGTGCCGTTGCTCCTGTTCCAAGATGGACTCTTCAACGGCGTATGCTCATGAATGGGACGTCAATGGCATCACCATCAGCTTGTGGTGGAACTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAGAACACAGCAGTTCCCATAGGTGATTTACCGGAGGATAAATTAACCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTATGAATATATACGGAAGTGCCAAAATACTCCACAAGTTTGGTATCAAATAAAGATCCAGCAATCTGGAAAAACATATCCTTCATCACGAGGCATCTACCTTAGGGAGGCTAGTGCTTGCCAACAATCTACTGAGTGGGCAGTGCAAGTTAATCCAAAATTTCATGAAGATGCCAGCAATTTTGATGACTTGGTTCCATTTGAGGAATGCATTGAGTTACACTCTACTGATAAGACAGTTGTGAAAGCCCCTGACTATCTACTGCTCACTCATAATGGTCGCACCTTCAATGTAGTTGTGGATCCTTCCAATCTATGTGATGGTCTTCATTATTACGAGGTTTATGGTATTGACTGCAAAGCACCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACCATAACCAAACCCCAGGCTGTAACTAATCAGCCTCCACAAGTTTCATTTTCAAAGATGTTATTCAAGCCAGGCCATATAGAACGGAGATTTATAGAAGTGCCACATGGTGCATCTTGGGTTGAAGCAACAATGAAAACATCAGGTTTCGATACTGCTCGGAAATTTTTTCTGGACGCTGTTCAGTTATGCCCATTGAAAAGACCACTGAAATGGGAGAAAGTGGTAACTTTTCCTTCTCCTGCTGCAAAAACCTTTGCCTTTAGGGTGGTAAGTGGTCAGACGTTGGAACTAGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACTGCCAATGTTGATTTTGAGGTTGTGTTTCATGGGATAGATGTAAATCAGGAAGAAGTTATACTTGATGGTAGTGAAGCACCAGTCAGAATTAATGCTGAAACACTACTGGCATCCGAGGAACTTTCACCTGTGGCAGTTCTAAACACGGTTAGAGTCCCATACCGACCAGTAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTGGCACTGACATTGACCTACAAGGTCAAATTGGAAGACGGGGCTAAAGTAAAACCTCAAATTCCGTTGCTAAATGACCGGATATATGACACTAAATTTGAGTCCCAACTTTATATTATTTCTGACTCAAATAAGCGTGTATATTCAAGTGGAGATGTTTATCCAAGCTCTTCAACCCTTCCCAATGGAGAATATAATTTACAGCTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGACATCTGGTGTTATTTGTTGAGCGAAATTTGGAAGAGAAGGATATCATTCGGTTAGGCTTTTTCTCTCAACCCGATGGCCCACTGATGGGAAATGGTTCCTTTAACTCCTCATTGTTAGTTCCAGGTATAAAGGAAGGATTTTATCTGGGTCCACCACCAAAGGATAAGCTTCCCAAGAATTCTCCACAAGGATCTGTATTGGTAGGTGCAATATCATATGGGAAACTATCATTTGCTGATCAGGGAGAGAATAAAAATCCAGAAAAGCACCCTGCATCGTACAGGGTTTCTTATATAGTTCCCCCTAATAAGATCGACGAGGACAAGGTAAAAGGTTCTTCCTTATCTCCCAAGAAGACTATATCTGATCATTTAAAAGAAGAGGTAAGGGATGCAAAAATAAAGGTTCTAGGAAGCCTAAGACAAGAAACTGACGAAGAGTGCTTGGAGTGGAAAGAGCTATCTACCAAGCTTAAATTGGAATATCCAAAGTACACTCCATTGCTAGCAAAGATTTTGGAAGGACTAGTTTCTAGAAGTAATATCAAGGACAAAATCCATCACAATGAAGAGGTGATTGATGCAGCAAATGAGGTGATTGACAGTGTTGACAGGGAAGAGTTAGCAAAATATTTGGCACTAGAAAGTGATCCAGAAGATGAGGAGACAGAGAGTATCAGAAAAAAGATGGAGTCAACCCGCGACCAATTAGCAGAGGCACTGTACCAAAAGGGGCTTGCACTGGCAGATATTGAATCTTCAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGAGGGAGATATATCGCCATCTTTGGCTGCAACAGAAGGTGCAAAAAAAGATGCGAGCAAGACTGGTGATCAGTCTAAAGGTGATGGAAGTAAGCCAGACCAATTTGAAGAGAACTTTAAAGAGCTGAAGAAATGGGTTGATGTGAAATCTCCTAAATATGGGATCCTCTTAGTGACACGCGAGAGGCGCTCAGGAAGGCTTGGGACAGCATTGAAGGTACTAAGTGACATAATTCAAGATGATAAAGAGCCTGCCAAAAAGAAATTCTATGAACTAAAGCTCTCTTTACTGGATGAGATTGGATGGACACATTGGGCTACATATGAAAGGCAATGGATGCTTGTGCGATTCCCTCCAAGCTTGCCCCTTTTCTAG 4044 0.4288 MPCASFTSGTGSVIAGDGENTNNNNNNNNSDGYSSIRDFKLNESTFLASLMPKKEIGVDRFLEAHSNYDGRGVLIAIFDSGIDPAAAGLQVTSDGKPKVLDVIDCTGSGDVDISKVVKADADGCIRGASGQSLIINTSWKNPSGEWHVGYKLVYELFTEDLTTRLKKERKKKWDEKNQEEIARAVKQLDDFDQQNVKVDAAKLKREREDLQNRIELLRRQSESYDDKGPVIDAVVWHDGEVWRVALDTQSLEDDPDYGKLANFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSIVTDCSPHATHVAGIATAFHPKELLLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALIAAVQHKCDLINMSYGEATLLPDYGRFVDLANEVVNKHRVTFVSSAGNSGPGLSTVGAPGGTSSSIIGIGAYVSPAMAAGAHSVVEPPSEGLEYTWSSRGPTADGDLGVSVSAPGGAVAPVPRWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGIPVSPYSVRKALENTAVPIGDLPEDKLTTGQGLMQVDKAYEYIRKCQNTPQVWYQIKIQQSGKTYPSSRGIYLREASACQQSTEWAVQVNPKFHEDASNFDDLVPFEECIELHSTDKTVVKAPDYLLLTHNGRTFNVVVDPSNLCDGLHYYEVYGIDCKAPWRGPLFRIPITITKPQAVTNQPPQVSFSKMLFKPGHIERRFIEVPHGASWVEATMKTSGFDTARKFFLDAVQLCPLKRPLKWEKVVTFPSPAAKTFAFRVVSGQTLELVISQFWSSGIGSHETANVDFEVVFHGIDVNQEEVILDGSEAPVRINAETLLASEELSPVAVLNTVRVPYRPVDSKISALSTDRDKLPSGKQILALTLTYKVKLEDGAKVKPQIPLLNDRIYDTKFESQLYIISDSNKRVYSSGDVYPSSSTLPNGEYNLQLYLRHDNVQILEKMRHLVLFVERNLEEKDIIRLGFFSQPDGPLMGNGSFNSSLLVPGIKEGFYLGPPPKDKLPKNSPQGSVLVGAISYGKLSFADQGENKNPEKHPASYRVSYIVPPNKIDEDKVKGSSLSPKKTISDHLKEEVRDAKIKVLGSLRQETDEECLEWKELSTKLKLEYPKYTPLLAKILEGLVSRSNIKDKIHHNEEVIDAANEVIDSVDREELAKYLALESDPEDEETESIRKKMESTRDQLAEALYQKGLALADIESSKLADLTWCILSKEGDISPSLAATEGAKKDASKTGDQSKGDGSKPDQFEENFKELKKWVDVKSPKYGILLVTRERRSGRLGTALKVLSDIIQDDKEPAKKKFYELKLSLLDEIGWTHWATYERQWMLVRFPPSLPLF 1347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0813 1347 PANTHER PEPTIDASE S8 21 1228 - -
Lal9g0813 1347 Pfam Tripeptidyl peptidase II 833 1017 IPR022229 -
Lal9g0813 1347 Gene3D - 1076 1347 - -
Lal9g0813 1347 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 50 532 IPR034051 GO:0006508|GO:0008240
Lal9g0813 1347 Gene3D - 566 700 - -
Lal9g0813 1347 MobiDBLite consensus disorder prediction 1239 1256 - -
Lal9g0813 1347 PANTHER TRIPEPTIDYL PEPTIDASE II 21 1228 - -
Lal9g0813 1347 Coils Coil 193 227 - -
Lal9g0813 1347 Gene3D Peptidase S8/S53 domain 230 563 IPR036852 GO:0004252|GO:0006508
Lal9g0813 1347 Gene3D Peptidase S8/S53 domain 53 144 IPR036852 GO:0004252|GO:0006508
Lal9g0813 1347 ProSitePatterns Serine proteases, subtilase family, serine active site. 490 500 IPR023828 -
Lal9g0813 1347 SUPERFAMILY Subtilisin-like 50 563 IPR036852 GO:0004252|GO:0006508
Lal9g0813 1347 PRINTS Subtilisin serine protease family (S8) signature 70 89 IPR015500 -
Lal9g0813 1347 PRINTS Subtilisin serine protease family (S8) signature 302 315 IPR015500 -
Lal9g0813 1347 PRINTS Subtilisin serine protease family (S8) signature 489 505 IPR015500 -
Lal9g0813 1347 Pfam Subtilase family 70 533 IPR000209 GO:0006508|GO:0008236
Lal9g0813 1347 ProSiteProfiles Serine proteases, subtilase domain profile. 55 553 - -
Lal9g0813 1347 MobiDBLite consensus disorder prediction 1232 1256 - -
Lal9g0813 1347 Gene3D - 168 226 - -
Lal9g0813 1347 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0813 Lal-Chr9 5866463 5884996 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0813 K01280 - gmx:100798235 2253.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0813 9 5866463 5884996 Lal9g0813 9 5866463 5884996 ECH
Lal9g0813 9 5866463 5884996 Lal13g0041 13 271258 294796 PCT
Lal13g0041 13 271258 294796 Lal9g0813 9 5866463 5884996 PCT