Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0811 ATGGAAACTCCAATCACACTCACCGGTATCCTCCGCAGCGCCGCCGATAGATTCCCCTCCCGCCGAGCCATCTCTCTCGCCGGACAGTTTGACCTCACCCACTCCCACCTCCATGACCTCGTCGAAATCGCCGCTGCTCGCCTTCTCTCCACCGGAATCAAGCCCGGCGATGTCATCGCCCTAACTTTCCCTAACACCGTCGAGTTTGTCATAATGTTTTTAGGTGTTATTCGAGCGAGAGCGACGGCAGCACCACTAAACGCGGCTTACACGGCGGAAGAGTTCGAGTTTTATTTATCTGACTCGGAATCGAAGCTTCTAGTAACATCAGAAGAAGGAAATAAAGCGGCTCAAACCGCAGCTTTAAAACTCAACATCCAAAACGTCACAGTTTCATTAACCCAAACCGATTCAAACCAACACCAACTCAACATTAACCTCAACCAGACCGAGTCATCAGATCCTAATTCCAACTCGATCACCGAACTCACTAACGATCCATCCGACGTGGCACTTTTTCTCCACACTTCCGGAACCACTAGCCGCCCTAAGGGAGTACCATTGACTCAGCACAATTTAGCCTCATCCGTTCAAAACATCGAATCGGTTTACCGACTCACTGAGTCAGACTCAACGGTTATAGTGCTCCCGCTTTTCCACGTCCACGGCTTGATCGCAGGGTTGTTGAGTTCACTCGGCGCCGGCGCGGCGGTGACGTTGCCAGCATCAGGTAGATTCTCCGCGTCGACGTTTTGGAAAGACATGGTAAATTACAACGCGACGTGGTACACAGCGGTTCCTACCATACACCAAATCATACTTGATCGTCATCAGAGTAATCCTGAACCGGTTTACCCGAAGCTCCGGTTTATTCGGAGTTGCAGCGCGTCGTTAGCACCGGCGATTCTGAGTCGGTTGGAAGAGACGTTCGGGGCGCCGGTTTTAGAGGCATATGCGATGACGGAAGCGTCGCATCTTATGTCTTCGAACCCGTTGCCGGAAGATGGAGTTCATAAGGCCGGGTCAGTAGGGAAACCCGTGGGTCAAGAAATGGCGACGTTGGATGAAACGGGTCGGGTTTTGGAAACGGGTGTGAATGGAGAGGTTTGTATTAGAGGAGAGAATGTGACGAAAGGGTATAAGAATAATCCGGAGGCTAATACGACAGCGTTTCAGTTTGGTTGGTTTCATACTGGTGATCTTGGCTATTTTGATTCGGATGGGTATTTGCATCTTGTGGGTCGGATCAAAGAGCTCATAAACCGTGGAGGAGAAAAGATATCACCAATAGAAGTGGATGCTGTCCTTCTATCTCACCCAGACGTTGCTCAAGCAGTGGCCTTTGGAGTGCCAGATGCCAAATATGGCGAAGAGATAAATTGTGCAATCATACCAAGAGAGGGATCAAACATTGATGAGGAAGAGGTGCTTAAATTTAGCAAGAAGAATCTTGCATCTTTTAAAGTCCCCAAAAAGGTTTACATCACTGATTCTTTCCCTAAGACCGCCACAGGTAAGATTTTAAGGCGCCTTGTGGCAGAACACTATGTCTCTCAAAATTGA 1563 0.4914 METPITLTGILRSAADRFPSRRAISLAGQFDLTHSHLHDLVEIAAARLLSTGIKPGDVIALTFPNTVEFVIMFLGVIRARATAAPLNAAYTAEEFEFYLSDSESKLLVTSEEGNKAAQTAALKLNIQNVTVSLTQTDSNQHQLNINLNQTESSDPNSNSITELTNDPSDVALFLHTSGTTSRPKGVPLTQHNLASSVQNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVTLPASGRFSASTFWKDMVNYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPAILSRLEETFGAPVLEAYAMTEASHLMSSNPLPEDGVHKAGSVGKPVGQEMATLDETGRVLETGVNGEVCIRGENVTKGYKNNPEANTTAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQAVAFGVPDAKYGEEINCAIIPREGSNIDEEEVLKFSKKNLASFKVPKKVYITDSFPKTATGKILRRLVAEHYVSQN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0811 520 Gene3D - 5 415 IPR042099 -
Lal9g0811 520 Gene3D - 416 518 IPR045851 -
Lal9g0811 520 SUPERFAMILY Acetyl-CoA synthetase-like 5 518 - -
Lal9g0811 520 Pfam AMP-binding enzyme 12 422 IPR000873 -
Lal9g0811 520 PANTHER ACYL-COA SYNTHETASE 1 519 - -
Lal9g0811 520 PANTHER OXALATE--COA LIGASE-LIKE 1 519 - -
Lal9g0811 520 Pfam AMP-binding enzyme C-terminal domain 431 506 IPR025110 -
Lal9g0811 520 ProSitePatterns Putative AMP-binding domain signature. 173 184 IPR020845 -
Lal9g0811 520 CDD FACL_fum10p_like 19 514 IPR045310 GO:0016874
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0811 Lal-Chr9 5850397 5856834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0811 6 519 Monolignol Biosynthesis Gene Families AT4G05160 30.916 1.22e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0811 K22133 - gmx:100779306 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0811 9 5850397 5856834 Lal9g0811 9 5850397 5856834 ECH
Lal2g0920 2 6150275 6159119 Lal9g0811 9 5850397 5856834 LSH