Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0793 ATGGCTTGTCTCTGGAGAGATATGACACCTTCTCGGGCAGCTGGAGGGTTAACCCAATCATCATTAAGTTCTGGAATTTTCTTTCAAGGAGATACGCAATCACAAAATATAATCAACTCTCATTTACGGTCGTCTTTTGGTAACAATTCTAACACCATTCATGGAACCGCTCGGTCGAATCATGGTCCGATGTCTGGGGAGGTCAGTAGTGCAGTTTTGAACAGTGTGGTAAACTCAGCGCGGAGTGTTGGAGCCAGTTCTTTAGTCACTGATGCAAATTCTGCACTCTCTGGTGGCCCTGATTTGCAGAGAAGTACAAGCATTAACACAGACCCATACTTACGTTTACCCACCTCGCCCATGTCATTTACATCAAATAATACTATTTCGGGGTCATCAGTCATGGATGGTTCTACTGGAGCTCAGCAGAATTCTCATCAAGATCAGAATGTTCAGCAATTGCAGCAAAATCCACTGCAGCTGCAGGGTGCCTCAAATGCTATGTCTTTGGCTGCATCTCAAACTGCTGCATCTCCAATACCAATGGGTGCACAAGTACCAGGATCTTTCAACCAAGATCCAAATAATTTATCCCAGTTAGCGAAGAAACCTAGGCTGGATATTAAACAGGAAGATATGATGAAACAACAGGCAATACAACAGATTCTTCAGAGACCAGACCTCATCCAAATGCAGGGTCACAATCCACAAATACATGCTTTGCTTCAGCAACAGAGACTGAGGCAACAGCAATTGTTTCAGTCTATGCCACAGCTTCAACGAGTGCACTTGCAGCAGCAGCAGCAGCAACAAAAGCAGCAGCAACAACAAGTGCAATTGAGGCAGCAATTTCAGCAACAAGCAATGCATCCCTCATCTGCTGTCAAGCGCCCATTTGACAATGGTGTTAGTGGTGTATGTGCCCGTCGATTGATGCAGTACCTCTATCATCAACGACAACGGCCAAATGATAATAGTATTGCGTATTGGAGAAAATTTGTAAGTGAGTATTACTCTCCCCGTGCAAAGAAGCGATGGTGCTTGTCATTATATAATAATGTTGGGCAGCATGCACTTGGCGTTTTCCCCCAAGCTGCTATGGATGCGTGGCAGTGTGACATGTGTGGTTCCAAATCTGGAAAGGGATTTGAGGCAGCTTTTGAAGTACTCCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTGATAGATGAACTGTTATTTTTGGACTTGCCGCGTGAATACAGATTTCAGTCTGGCGTGATGATGTTAGAATATGCTAAAGCAGTTCAAGAGAGCGTATACGAGCAGCTTCGTGTTAGTCGTGAGGGTCATCTTCGTATCATATTTACTCAAGACCTGAAGATATTATCTTGGGAGTTCTGCGCAAGGCGTCATGAAGAAATTCTCCCTCGTAGGTTGGTTGTACCACAGGTCAACCGATTGGTTCAAGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGATCAGACGGGGTTTCTCAACAAGACCTGCAAGCAAACAGCAATATGGCATTGACAGCTGGGCATCAGCTTGCGAAGAGTTTGGAGTTACAATCGCTAAACGAGTTGGGTCTTTCCAAAAGATATGTGAGATTCTTGCAGATTTCTGAGGTTGTCAATAGCATGAAAGATCTGATTGACATATGTAAAGAGTACAAAGTTGGGCCAATTGAGAGCTTGAAAAATTATCCTCAATTTGCAACTGCGGCCAAGCTCCAGATGCATGAGATGGAACGGCTAGCAAATGTTCAAGGTCTTCCAACTGATCGAAATACACTTAATAAGCTCATGGCATTGAATCCAGGATTTAACAATCAAGTAAACAATAAGCATAATATGGTTAATAGTGGTGCTTTGAGTGGGTCAGCACAAACTGCTTTGGAACTGTCTAACTTTCAGAATATTCTCATGAGGCAAAACTCGATGAATTCAAGCCCTGGCCCACTTCAGATGGAAGGATCATCTTCTTTCAATCAATTGAACCAGAGTCCCTCTTCATCTTTGCAAGGTTCTGCTGCAGCAGCTGCTGCTTTAATTCCAGGGTCGATGTGGAATTCTACCAGTAGGGGTTTCCCAAGTCCCTATCATCTTCCACCCCAGCAGCAACACCATCAGCTTCAACAATGCTCACGAATTGCAAATAACTTACCCCAACAAAATTATTCACAGGGATCCAATGGTAACCAAGCTATACAACAGCAGTTCATCCAGCAACTGCAACAGGATATGTCAAATAACAACAATGGGGGAGTTCAACCACAATCTGTTGTTGGTGGACCCAATGCAAATGGGATTAACATGTTCAAGAATGGGTTAGGTTTTGGTGGCCACACTCCATCCATGTCCAGATCCTCTGGCCACGTTTCCGGAAATAATGAGCCTAACAGCTTCAACGCAGTTTCAAACAATGATTCTTCTGCAGCAACTGATGGCAAGAATGGGTTCTACCAGAGAACATCTGATATGCCACAAAATCAACATATGCAGGATATTTCCCATGAATTCACTGAAAATTCTTTCTTTAACAATGATCTAGATGATAACTTGGGTTTTGGCTGGAAGCCATAA 2595 0.4339 MACLWRDMTPSRAAGGLTQSSLSSGIFFQGDTQSQNIINSHLRSSFGNNSNTIHGTARSNHGPMSGEVSSAVLNSVVNSARSVGASSLVTDANSALSGGPDLQRSTSINTDPYLRLPTSPMSFTSNNTISGSSVMDGSTGAQQNSHQDQNVQQLQQNPLQLQGASNAMSLAASQTAASPIPMGAQVPGSFNQDPNNLSQLAKKPRLDIKQEDMMKQQAIQQILQRPDLIQMQGHNPQIHALLQQQRLRQQQLFQSMPQLQRVHLQQQQQQQKQQQQQVQLRQQFQQQAMHPSSAVKRPFDNGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVSEYYSPRAKKRWCLSLYNNVGQHALGVFPQAAMDAWQCDMCGSKSGKGFEAAFEVLPRLNEIKFGSGVIDELLFLDLPREYRFQSGVMMLEYAKAVQESVYEQLRVSREGHLRIIFTQDLKILSWEFCARRHEEILPRRLVVPQVNRLVQVAQKCQSTIAESGSDGVSQQDLQANSNMALTAGHQLAKSLELQSLNELGLSKRYVRFLQISEVVNSMKDLIDICKEYKVGPIESLKNYPQFATAAKLQMHEMERLANVQGLPTDRNTLNKLMALNPGFNNQVNNKHNMVNSGALSGSAQTALELSNFQNILMRQNSMNSSPGPLQMEGSSSFNQLNQSPSSSLQGSAAAAAALIPGSMWNSTSRGFPSPYHLPPQQQHHQLQQCSRIANNLPQQNYSQGSNGNQAIQQQFIQQLQQDMSNNNNGGVQPQSVVGGPNANGINMFKNGLGFGGHTPSMSRSSGHVSGNNEPNSFNAVSNNDSSAATDGKNGFYQRTSDMPQNQHMQDISHEFTENSFFNNDLDDNLGFGWKP 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0793 864 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 12 158 - -
Lal9g0793 864 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 164 863 - -
Lal9g0793 864 MobiDBLite consensus disorder prediction 649 677 - -
Lal9g0793 864 Pfam LIM-domain binding protein 310 570 IPR029005 -
Lal9g0793 864 MobiDBLite consensus disorder prediction 752 770 - -
Lal9g0793 864 MobiDBLite consensus disorder prediction 96 153 - -
Lal9g0793 864 MobiDBLite consensus disorder prediction 786 820 - -
Lal9g0793 864 MobiDBLite consensus disorder prediction 752 820 - -
Lal9g0793 864 PANTHER LIM DOMAIN-BINDING PROTEIN 164 863 IPR029005 -
Lal9g0793 864 PANTHER LIM DOMAIN-BINDING PROTEIN 12 158 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0793 Lal-Chr9 5695226 5705523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0793 305 574 C2H2 Transcription Factor Family AT1G43850 57.037 3.09e-101 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0793 - - gmx:100816886 1085.48