Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0792 ATGACACCCTCTCGGGTGGCTGGAGGATTAACACAATCATCATTAAGTTCTGGAATTTTCTTTCAAGGAGATACGCAATCACAGAATATAATCAACTCTCACTTAAGCTCGTCTTTTCGTAACAATTCTAACACCATTCATGGAACTGCTCGGTCGAATCTTGGTCCAGTTTCTGGGGACATCAATAGTGGAGTTTTGAATGGTGTGGTAAACTCAGCGCGAAGTGTTGGAGCTAGTTCTTTAGTCACTGATGCAAATTCTACACTCTCTGGTGGCCCCAATTTGCAGAGAAGTGCAAGCATTAACACAGACCCATACTTACGTTTACCTGCCTCGCCCATGTCATTTACATCAAATAATACTATTTCAGGGTCATCAGTTATGGATGGTTCTACTGGAGGTCATCAGAGTTCTCATCAAGATCAGAATGTTCAGCAATTGCAGCTTCAGGGTGCCTCAAGTGCTATGTCTTTGCCTTCATCTCAAATTTCTGCACCTACAATACCAATGGGTGCACAAGTATCAGGATCGTTCATCCAAGATCCAAATAATTTATCCCAGTTATCGAAGAAACCTAGGCTGGATATTAAGCAGGAAGATATGATGAAACAGCAGGTAATGCAACAGATTCTTCAGAGACCAGACCTCATCCAAATGCAAGGTCATAATCCACAGATGCATTCTTTAATTCAGCAGCAGCAGAGAGTGAGGCAACAGCAAATGTTTCAGTCAATGCCACAGTTTCAACGAGTGCACTTGCAGCAGCAGCAGCAGCAGCACCAACAACAACAACAACAAAAGCAGCAACAGCAACAAATGCAATTGAGGCAGCAATTGCAGCAACAAGCAATGCAGCCCTCATCTTCTGTCAAGCGCCCATTTGACAATGGTGTTAATGGTGTTTGTGCCCGTCGATTGATGCAGTACCTCTATCATCAACGACAACGGCCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTAACTGAGTATTACTCTCCCCGTGCAAAGAAGCGGTGGTGCTTGTCATTATATAATAACGTTGGGCAGCATGCACTCGGTGTTTTTCCCCAAGCTGCTATGGATGCATGGCAGTGCGATATATGTGGCTCCAAATCTGGAAAGGGTTTTGAGGCAACTTTTGAAGTACTCCCTAGACTTAATGAAATCAAATTTGGCAGTGGTGTGATCGATGAACTGTTGTTTTTGGACATGCCACGTGAATATAGATTTCAGTCTGGTATGATGATGTTAGAATATGCTAAAGCAGTTCAAGAGAGCGTATACGAGCAGCTTCGTGTTAGTCGTGAGGGTCATCTTCGTATCATATTTACTCAAGACCTGAAGATATTATCCTGGGAGTTCTGCGCAAGGCGTCATGAAGAACTTCTGCCTCGTAGGTCGGTTGTACCACAGGTCAACCAGTTGGTTCAAGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGTCAGATGGGGTTTCTCAGCGAGACCTGCAAGCAAACAGCGATATGGTATTGACAGCTGCACGTCAGCTTGCGAAGAGTTTGGAATTACAATCGCTAAATGAGTTGGGTCTTTCCAAAAGATATGTGAGATTCTTGCAGATCTCTGAGGTTGTCAATAGCATGAAAGATCTGATTGACATATGTAATGAGCATAAAGTTGGGCCAACTGAGAGCTTGAAAAATTATCCTCAATTTGCAACTGCGGCCAATCTCCAGATGCAAGAGATGGAACAGCTAACAAATGTTCAAGGTCTGCCAACTGATCGAAATACTCTTAATAAGCCGATGACATTGAATCCTGGATTTAACAACCATGTAAACAATAATCATAATATGGTTAATTGTGGTGCTTTGAGTGGGTCAGCACAAACTGCTTTGGAACTGTCTAACTATCAGAATATTCTCATGAGGCAAAGCTCGATGAATTCAAGCCCTGGCCCACTTCAGAGAGAAGGATCGACTTTCAATCAATTGAACCAGAGTCCTTCTTCATCTTTGCAAGGCACTGCTACTGCTTTAATTCCAGGGTCAATGCAAAATTCTACCAGTCGGGGTTTCCCAAGTCCCCTTCATCTACCACCCCGGCTGCAACACCCTCAGCTTCAACAGCGCTCACTAAGTGCAAATAGCTTGTCCGTACAGAATTATTCACAGGGATCCCAAGGAAACCAAGCTATACAACAGCAGTACATCCAGCAACTGCTGCAGGATATGTCAAATAACAACAATGGGGGAGTTCAACCACAGTCTGTTGTTGGTGGACCCAGTGCAAATGGGAATAACATGTCCAATAATGGGTTAGGTTTTGGAGGCCACACTCCATCTATGTTCGGATCTTCTGCCCGTGTTTCCGGAAATAGTGAGCCTGTTTCTAGGAGTAACAGCTTCAAGGCAGTTTCAAACAGTGATTCTTCTGCACCAGCTGATGGAAACAATGGGTTCAACCAGAGAACATCTAATATGCCGCAAAATCAACATATGCAGGATACGGTTCAGGATATTGCCCATGAATTTACAGAAAATTCTTTCTTTAACAATGATCTAGATGAGAATATGGGTTTTGGCTGGAAGCCATAA 2592 0.4321 MTPSRVAGGLTQSSLSSGIFFQGDTQSQNIINSHLSSSFRNNSNTIHGTARSNLGPVSGDINSGVLNGVVNSARSVGASSLVTDANSTLSGGPNLQRSASINTDPYLRLPASPMSFTSNNTISGSSVMDGSTGGHQSSHQDQNVQQLQLQGASSAMSLPSSQISAPTIPMGAQVSGSFIQDPNNLSQLSKKPRLDIKQEDMMKQQVMQQILQRPDLIQMQGHNPQMHSLIQQQQRVRQQQMFQSMPQFQRVHLQQQQQQHQQQQQQKQQQQQMQLRQQLQQQAMQPSSSVKRPFDNGVNGVCARRLMQYLYHQRQRPNDNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGQHALGVFPQAAMDAWQCDICGSKSGKGFEATFEVLPRLNEIKFGSGVIDELLFLDMPREYRFQSGMMMLEYAKAVQESVYEQLRVSREGHLRIIFTQDLKILSWEFCARRHEELLPRRSVVPQVNQLVQVAQKCQSTIAESGSDGVSQRDLQANSDMVLTAARQLAKSLELQSLNELGLSKRYVRFLQISEVVNSMKDLIDICNEHKVGPTESLKNYPQFATAANLQMQEMEQLTNVQGLPTDRNTLNKPMTLNPGFNNHVNNNHNMVNCGALSGSAQTALELSNYQNILMRQSSMNSSPGPLQREGSTFNQLNQSPSSSLQGTATALIPGSMQNSTSRGFPSPLHLPPRLQHPQLQQRSLSANSLSVQNYSQGSQGNQAIQQQYIQQLLQDMSNNNNGGVQPQSVVGGPSANGNNMSNNGLGFGGHTPSMFGSSARVSGNSEPVSRSNSFKAVSNSDSSAPADGNNGFNQRTSNMPQNQHMQDTVQDIAHEFTENSFFNNDLDENMGFGWKP 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0792 863 Pfam LIM-domain binding protein 305 565 IPR029005 -
Lal9g0792 863 PANTHER LIM DOMAIN-BINDING PROTEIN 5 148 IPR029005 -
Lal9g0792 863 PANTHER LIM DOMAIN-BINDING PROTEIN 157 269 IPR029005 -
Lal9g0792 863 PANTHER LIM DOMAIN-BINDING PROTEIN 267 862 IPR029005 -
Lal9g0792 863 MobiDBLite consensus disorder prediction 643 692 - -
Lal9g0792 863 MobiDBLite consensus disorder prediction 643 712 - -
Lal9g0792 863 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 157 269 - -
Lal9g0792 863 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 267 862 - -
Lal9g0792 863 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 148 - -
Lal9g0792 863 MobiDBLite consensus disorder prediction 118 164 - -
Lal9g0792 863 MobiDBLite consensus disorder prediction 743 828 - -
Lal9g0792 863 MobiDBLite consensus disorder prediction 743 775 - -
Lal9g0792 863 Coils Coil 250 282 - -
Lal9g0792 863 MobiDBLite consensus disorder prediction 782 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0792 Lal-Chr9 5684706 5693099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0792 300 569 C2H2 Transcription Factor Family AT1G43850 58.519 3.95e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0792 - - gmx:100816886 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0792 9 5684706 5693099 Lal9g0792 9 5684706 5693099 ECH