Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0788 ATGGCTATTGAGAAAGTCAATTTAACTGTTTTGGTTGTGGATGAGGATGATACTTCTCTGACCATTGTTTCTAACATACTCAGCTCATGGGATTACAAAGTTCTCACAGCCAATAGTGTTGATAGTGCTTTGAAGACTCTTCGAGAGAGTGAAGGTTTTTTCGATCTTGTTATGACAGAAGTTCATATGTCAGGAATGAATGGATATGAGTTTCAACAATGCATAAAAGATGAATTCAAGCTACCTGTAATAATGATGTCTACAGAAGATGGAAAGAAAGAAGCCATGTCCAATAGTGAATCAGAAAACGAAGAATCACTTCATCTTTTGAAACCCATTTCCACTGATGACTTAAAAGATGCATGTAAATATGCTTTGGCTGCAAGGGAAAAGAAACTAGTGATTCAAAATGAACCAAGTAGTGAAGAAGAGTCACCAGCAGAAAAGAATATTATCAATGAGGATATTGATTCTTCTTCTGCACCATCAACAGTGACTAATGTGACAAAGAGAAAAAGAAAATATACCAACAGAAGGAGCATTGAAATGAATAGTGAAAACCAGAGTGAAGATAGTTATAGGGTTCAAAAGAAACCAAAGATGGTTTGGACAACACACCTTCACAATCTGTTTATGACAGCCATAAAAAAACTTGGATATGATAAGGCTGTACCAAAGAGCATTCTTGAGGTCATGAATGTGCCATGCTTGACAAGAGAAAATGTGGCTAGTCACTTACAGAAGTATCGCATTTTCCTGAGAAGCCTCGCAGGGAGAGGAATACTTGAAGGCTTATCTGGTAGGACCCTAAAGTCAATGTTTGCTTCTGGAATAACACCATCAGTGATTAAAGAAATCCAAACAAGAAGTGAGAAACTGCGTGTTCCAGTGCAACAATATCTGAAAAATGTTGCACGTGAACCAGAAAATGTACACACTGCTTATTATTCTAAACTTTTCAACCGTGGTTCATTTAATCCTCCTAATGTACAAGTTCAAAGAAGTGCTTATATGACTACAGAACTTGGAAGAGGTCAAATTCCTAATGCAATGTACACAGGCCTGGTGCATCAAAATCAGCAAGCTTTTAATGGTTATAGTTCCTTGAATCATGTTAGGCTTGGACAATCAAGTTATGGAGCCAATGAAATGCAGAAAAAATTGTTGGGAAACAATGCAAACCCACTTTACAATTCTGGTGCTATAAACTTCCCATCATATGGAAATGGAATTGGATTGATGACTTCAGAAAATGGCATAACAGGAAGTTTGTCACAAAACTATAGTTCATCATTTGGAAATCAAAGCTTCAAATATGGTCTAGGAAATGGGGGCATGGCATCTTTGAGCAACTCAAATGTGCTATGGAATAGCTCTACTTGTTATCCTCAGAGAAATAACTCATATGGAATTCAACTGAATGGTGGATCACAATTTTTTGGGTCAGGGATCAAAGGAGGGTATAATAGTGTTGGTACTAGGACTACTTTTGGGAACAACTATAGATCTATCTTTGCCATGAATGGGACTCAAAATGCAAATATGCATAACAACAACAGCTTTGGCTTGGTCAATGGAACTCAAAATACAAACATGCATGTTGCACCCTGGAGGCATAACAACAATAGCTTTGGCTTAGTCAATGGTATTCAGAATGCAAATATGCATAACAACAATAACTTTGGCTTGGTCAATGGTATTCAAAATGCAATGATGCATAACTACAATAGCTTTGGCTTGGTAAATGGTATTCAAAATGCAAATATGCATAACAACAATAGCTTTGGCTTGGTCAATGGTACTCAAGATGCAAATATGCATAACAACAATAGCTTTGGCTTGATTAATGGTACTCAAAATACAAATATGCATGTGGGTATGAAACCCTTAGGGCAGGGAAACAGTGCTGGTGAGAGTGGGTATGTAACTGACCCTCATTTACAATCATTAAACAGTAATGAAAATTCTAGGAATACAAATGCTGCAGAAAATGGGAATCAGTATAATAGTATTTCAATCACTGAAGGTGAGGTCAATAACCTACAATATGATCTTTCTGAACTCTTCATGATGGTACAGAACATGGAGTTTCTTAACGAGATTGAAGAGACCCCTGATGTTAGTGAATCTTTGAATTCTAATTTTTCTGTCTCCACTCAAGTTATGAAGCCACCGAAGCAGGACAGTGACAAATTCGTGGACTGGGAGTCCCTTGATAGATTCTGGGTTGACAGTGATTTTTCTAGAAGCTTAAGCAACTCAGCCATTGACGAGGCAAGTTTTTTTTATCGGCAAATGTTAAGA 2304 0.3724 MAIEKVNLTVLVVDEDDTSLTIVSNILSSWDYKVLTANSVDSALKTLRESEGFFDLVMTEVHMSGMNGYEFQQCIKDEFKLPVIMMSTEDGKKEAMSNSESENEESLHLLKPISTDDLKDACKYALAAREKKLVIQNEPSSEEESPAEKNIINEDIDSSSAPSTVTNVTKRKRKYTNRRSIEMNSENQSEDSYRVQKKPKMVWTTHLHNLFMTAIKKLGYDKAVPKSILEVMNVPCLTRENVASHLQKYRIFLRSLAGRGILEGLSGRTLKSMFASGITPSVIKEIQTRSEKLRVPVQQYLKNVAREPENVHTAYYSKLFNRGSFNPPNVQVQRSAYMTTELGRGQIPNAMYTGLVHQNQQAFNGYSSLNHVRLGQSSYGANEMQKKLLGNNANPLYNSGAINFPSYGNGIGLMTSENGITGSLSQNYSSSFGNQSFKYGLGNGGMASLSNSNVLWNSSTCYPQRNNSYGIQLNGGSQFFGSGIKGGYNSVGTRTTFGNNYRSIFAMNGTQNANMHNNNSFGLVNGTQNTNMHVAPWRHNNNSFGLVNGIQNANMHNNNNFGLVNGIQNAMMHNYNSFGLVNGIQNANMHNNNSFGLVNGTQDANMHNNNSFGLINGTQNTNMHVGMKPLGQGNSAGESGYVTDPHLQSLNSNENSRNTNAAENGNQYNSISITEGEVNNLQYDLSELFMMVQNMEFLNEIEETPDVSESLNSNFSVSTQVMKPPKQDSDKFVDWESLDRFWVDSDFSRSLSNSAIDEASFFYRQMLR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0788 768 PANTHER RESPONSE REGULATOR 23-RELATED 8 559 - -
Lal9g0788 768 Pfam Response regulator receiver domain 10 121 IPR001789 GO:0000160
Lal9g0788 768 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 254 IPR017930 -
Lal9g0788 768 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Lal9g0788 768 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 559 IPR045279 GO:0009736
Lal9g0788 768 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Lal9g0788 768 ProSiteProfiles Response regulatory domain profile. 9 126 IPR001789 GO:0000160
Lal9g0788 768 Gene3D - 7 145 - -
Lal9g0788 768 Gene3D - 194 256 - -
Lal9g0788 768 SUPERFAMILY CheY-like 8 130 IPR011006 -
Lal9g0788 768 SMART REC_2 8 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0788 Lal-Chr9 5625146 5634497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0788 6 274 Response Regulator Gene Family AT5G07210 35.374 1.18e-42 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal9g0788 Response_reg 1.7e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0788 - K14491 lang:109352896 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0788 9 5625146 5634497 Lal9g0788 9 5625146 5634497 ECH