Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0785 ATGGCTGTTACCAAGAGCAACAGCGGCAATGAACCGTCTACTTCATACAAGTGTTATAAAGTAGCAGGCTTGGTGGGAACCATATTAGACACAAATCATGTCTCTAATTTGAAAGATAGATACATTCTCGGGGAGCAGTTAGGTTTGGGACAGTTTGGTGTCATTCGGGCTTGCTACGACAAGCTGACAGGAGAGGTTTTGGCCTGCAAATCAATCGCGAAAGATCGGTTGGTTACTTCGAATGATCTGAGGAGTGTCAAACATGAGATTGAGATAATGGCTACTCTATCTGGGCACCCAAATGTTGTAGACCTCAAGGCAGTTTATGAAGAGGAAGATTATGTCCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAACTGTTTCACCGATTAGAGAAGCATGGACGATTTTCTGAAACTGAAGCTAGGATTCTCTTTAGGCACCTAATGCAGGTTGTTTTGTATTGTCATAAAAATGGGGTTGTTCATAGAGATCTGAAGCCGGAGAACATGGCAACGAGAGCCTCCTCATCTCCTATTAAATTGGCAGATTTTGGTCTTGCAACCTACATCAAGCCTGGACAAAGTTTGCATGGATTAGTTGGAAGTCCGTTCTATATAGCTCCAGAGGTACTGGCAGGTGCATATAACCAGGCTGCTGATGTGTGGAGTGCCGGTGTTATTCTTTACATTCTATTGAGTGGGATGGCTCCATTTTGGGGTAAGACCAAGTCACGGATATTTGAAGCTGTTAAAGCTGCTGACCTGAGATTCTCACCAGATCTTTGGGATCACATTTCTGAATCGGCTAAGGATTTGATCAAGGGAATGCTCTGTACAGAAGCTTCTCGAAGGCTCACTGCCCAGGAGGTTTTAGATCATTGCTGGATGGAAAACAATCAAACAAATCTCGAACAACTAATCGAACATAGAATTCAAAGTTGTGAAGAATGGGATGTTGGTGGCAGCTCCTTCTCTGCCTCTTTTATGTCCAGAAACCAGGACATCAGCTTTGGCGTTGGATCACCTGCGTGTGATACTCAATCACCTACATTCACATGCAGATCGTCATTTTTTCCTTTCGTGGAACCAGTGACTCCTTGTGTAGTTTCTGGCGGCTTTTCATTTCGAAGTGCAGGCGATTCCACTGATTTGGAATTTTCTTCTCCTATTCCCTCAATGCTTAGCTTTTCATTTCTCAGCCTTAGTCCCGTTGTTGAGCAAAAGAGTTGTAAATTAGATTGCTCAGCCAACACTTCAGATGCAAATGCCAGAGAAGCAAGCTTGGGAAAGTTGCTGTCACTACCAGATTCTACCCTTTTCTCTGTAAAAGATGTTAAGGAAATGGATCAAAAGCCTGTAGAGACTAAAAGAGCTGGTGTAACGAATGGACATGATCGGGTACTGGGAATCCACAGCAAGAGAAACCGGACTATTGGACTTGGTGAACACGAGCAACTTGATCTTGTGGTGACTGAATCAGTAATCCGTTGGTCATCGTGCACGCAACTCCCCACATCTTTGAGATCGTCTCTTGTTTGTTAA 1545 0.4395 MAVTKSNSGNEPSTSYKCYKVAGLVGTILDTNHVSNLKDRYILGEQLGLGQFGVIRACYDKLTGEVLACKSIAKDRLVTSNDLRSVKHEIEIMATLSGHPNVVDLKAVYEEEDYVHLVMELCAGGELFHRLEKHGRFSETEARILFRHLMQVVLYCHKNGVVHRDLKPENMATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMAPFWGKTKSRIFEAVKAADLRFSPDLWDHISESAKDLIKGMLCTEASRRLTAQEVLDHCWMENNQTNLEQLIEHRIQSCEEWDVGGSSFSASFMSRNQDISFGVGSPACDTQSPTFTCRSSFFPFVEPVTPCVVSGGFSFRSAGDSTDLEFSSPIPSMLSFSFLSLSPVVEQKSCKLDCSANTSDANAREASLGKLLSLPDSTLFSVKDVKEMDQKPVETKRAGVTNGHDRVLGIHSKRNRTIGLGEHEQLDLVVTESVIRWSSCTQLPTSLRSSLVC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0785 514 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Lal9g0785 514 SMART serkin_6 41 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0785 514 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Lal9g0785 514 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Lal9g0785 514 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 507 - -
Lal9g0785 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 507 - -
Lal9g0785 514 Pfam Protein kinase domain 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0785 514 ProSiteProfiles Protein kinase domain profile. 41 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0785 514 SUPERFAMILY Protein kinase-like (PK-like) 38 373 IPR011009 -
Lal9g0785 514 CDD STKc_CAMK 40 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0785 Lal-Chr9 5595845 5599450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0785 37 302 EF-hand Containing Proteins AT3G57530 50.373 3.28e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal9g0785 Pkinase 3.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0785 - - lang:109338501 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0803 1 5472539 5476443 Lal9g0785 9 5595845 5599450 LSH