Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0769 ATGCCTTCTCTTCCCATCTCCAACGACGCCGTTCTCATCACCGACAAGAAACAGAAGAAGGACAAGAAAACCAAGAAAAACGACGCCGACAACGAAAACCAGTCTCTAAACGACGCCGTTTACGTTAAGAAGAGTGTTTCGAAGGAGTCCAAGAAGAAGAGAAAGAAGCTTTCATCTTCTTCTTCTGATGAAGGTAATAATGATGATGATGAGAAGAAGAGTGAGAATAGCGATGAGGGTTTGAAATCGAAGGAGAAGAAGAAGAATAAGAAAGCGAAGTTGGATATGGAAGAGGAAGAAGAGGTTGTGGTCGAAGCTGAGAATCCCAACGCGGTATCCAATTTCAAGATATCGGAACCGTTGAAAGCGAAACTGAAGGAGAATGGAATTGAAGCGTTGTTCCCGATTCAAGCCACGACCTTCAAAATCATCCTCGATGGCTCCGATTTGGTTGGTCGTGCTCGCACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTCCGGCAAAAACATCAAGGAAGACGGGCTACGGCAGGACTCCAAGTGTCATTGTGCTTCTACCTACTAGGGAATTGGCTAAACAGGTGAATGCTGATTTCGAAGTTTATGGTGGAGCAATGGGATTGGCTTCTTGCTGTTTATATGGTGGAGCTCCATATCAAGCTCAAGAGATTAAACTCAGGAGGGGTGTTGACATTGTTATTGGCACACCTGGCCGCATAAAGGATCATATAGAGCGAGGAAATATTGACCTGAGCCTACTTAGGTTTCGTGTCCTTGATGAGGCTGATGAGATGCTAAGGATGGGTTTTGTTGAAGATGTTGAACTCATTCTAGGTAAGGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACTTTGCCAGTCTGGGTTAAACAGATTTCTACAAGATTTTTGAAACATGATAAGAAAACTATTGATCTTGTTGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGGCATATTGTTCTTCCATGTAATAGTTCTGCCAGGTCCCAGCTTATCCCTGACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAGCTTGCAGGGGTGTTGCCTGGAGCAAGACCTCTCCATGGTGACATACAACAGTCACAACGTGAGATTACATTAGCAGGCTTTAGGTCTGGAAAATTCTTGACATTGGTGGCCACAAATGTGGCAGCTAGGGGTCTGGATATTAATGATGTTCAGTTAATTATCCAGTGTGAGCCTCCACGGGATGTTGAAGCATATATCCATCGTTCTGGGCGTACAGGAAGAGCTGGTAATACTGGAGTTGCTGTGATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAAAGAGAATCGGGTGTGAAATTTGAACATATTTCTGCTCCTCAGCCTGATGATATTGCCAGAGCTGTTGGTGGGGAAGCTGCTGAAATGATTTTGCAAGTGTCTGATAGTGTGGTTCCCGCATTCAAGTCTGCTGCCGAGGGGCTTTTGAATAACAGTGGTTTATCGGCTGTTGAATTACTTGCAAAAGCTCTTGCCAAGTCTGTTGGTTTTACTGAGATAAAGAAAAGATCACTTCTGACTTCCATGGAGAATTATGTTACATTACAACTTGAAATCGGAAAACCTATGTTCACCCCATCTTTTGCATTTGGAGTCCTGAGGAGATTTGTGCCCGAGGAGAAAGTCAACGAAGTGCAGGGTCTTACTATCACAGCAGATGGAAATGGCGCTGTCTTTGATGTACCGGCCAAATATTTAGATGCATTTCTTACTGGTCAGCAAAATGCTGGTAATGTAAGTCTGGAGGTGGTTAAAGCATTGCCACGTTTGCAAGAAAGAGAGGAATCGAAAATGGGTAGATTTGGTGGTGGTGGTCGCGGATTTGGTGGGAGTAGATTCGGTGGAAGAGGTGGTAGGAATGGTGGGAGTAGATTTGGTTTTGGTGGTGGGAGAGGTGGAAACAGAGGCGGAAGGAGATGGTAG 2067 0.4388 MPSLPISNDAVLITDKKQKKDKKTKKNDADNENQSLNDAVYVKKSVSKESKKKRKKLSSSSSDEGNNDDDEKKSENSDEGLKSKEKKKNKKAKLDMEEEEEVVVEAENPNAVSNFKISEPLKAKLKENGIEALFPIQATTFKIILDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKTSRKTGYGRTPSVIVLLPTRELAKQVNADFEVYGGAMGLASCCLYGGAPYQAQEIKLRRGVDIVIGTPGRIKDHIERGNIDLSLLRFRVLDEADEMLRMGFVEDVELILGKVEDVNKVQTLLFSATLPVWVKQISTRFLKHDKKTIDLVGNEKMKASNNVRHIVLPCNSSARSQLIPDIIRCYSSGGRTIIFTEKKESASELAGVLPGARPLHGDIQQSQREITLAGFRSGKFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSRIERESGVKFEHISAPQPDDIARAVGGEAAEMILQVSDSVVPAFKSAAEGLLNNSGLSAVELLAKALAKSVGFTEIKKRSLLTSMENYVTLQLEIGKPMFTPSFAFGVLRRFVPEEKVNEVQGLTITADGNGAVFDVPAKYLDAFLTGQQNAGNVSLEVVKALPRLQEREESKMGRFGGGGRGFGGSRFGGRGGRNGGSRFGFGGGRGGNRGGRRW 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0769 688 MobiDBLite consensus disorder prediction 13 32 - -
Lal9g0769 688 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 352 494 IPR001650 -
Lal9g0769 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 468 IPR027417 -
Lal9g0769 688 Gene3D - 60 326 IPR027417 -
Lal9g0769 688 CDD GUCT_RH7_like 551 636 - -
Lal9g0769 688 Pfam DEAD/DEAH box helicase 134 311 IPR011545 GO:0003676|GO:0005524
Lal9g0769 688 MobiDBLite consensus disorder prediction 1 97 - -
Lal9g0769 688 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 48 668 - -
Lal9g0769 688 MobiDBLite consensus disorder prediction 56 97 - -
Lal9g0769 688 SMART helicmild6 378 455 IPR001650 -
Lal9g0769 688 MobiDBLite consensus disorder prediction 645 688 - -
Lal9g0769 688 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 141 323 IPR014001 -
Lal9g0769 688 Coils Coil 19 39 - -
Lal9g0769 688 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 267 275 IPR000629 -
Lal9g0769 688 Gene3D - 562 634 - -
Lal9g0769 688 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 7 48 668 - -
Lal9g0769 688 Coils Coil 82 102 - -
Lal9g0769 688 CDD DEADc 121 318 - -
Lal9g0769 688 CDD SF2_C_DEAD 338 464 - -
Lal9g0769 688 SMART ultradead3 129 341 IPR014001 -
Lal9g0769 688 Pfam GUCT (NUC152) domain 544 639 IPR012562 GO:0003723|GO:0004386|GO:0005524
Lal9g0769 688 Pfam Helicase conserved C-terminal domain 357 455 IPR001650 -
Lal9g0769 688 Gene3D - 333 561 IPR027417 -
Lal9g0769 688 SUPERFAMILY RNA-binding domain, RBD 548 631 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0769 Lal-Chr9 5389127 5394088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0769 147 461 Eukaryotic Initiation Factors Gene Family AT1G72730 30.094 1.86e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0769 K16911 - egr:104424322 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0769 9 5389127 5394088 Lal9g0769 9 5389127 5394088 ECH