Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0763 ATGGAGGAAAGAGAGATTTTTGGTTCTGGGCATGTGGTTAAGGGTGATGAGGCCAGAGAGAGCTTCCACGTGGCATCAAGAACTGAAGACTTCATGCAGTTTCCCGGCACGGCGGAGCTTCCGACTGTGGCGGCGGAGCTTCCGGCTGTGGCGGAGGAGATTCCGGCTGTGGCGGCAGAGCTTCCGGCTATTACAGCAGAGCTTCCGGCTGTGGCAGCAGAGATTCCGGCTGTGGTAGCGGAAATTCCGGCTGTGGCGCCTGTGTCTGCGGTGGTAACACCAGCAACAGAAGGGAAGAAGAAGAGGGGCAGGCCTAGAAAGTATGGACCGGACGGCAAGGTGGCGGCAGTGGCAAGGGCCCTGTCGCCCATGCCGATTTCAGCGTCGATTCCGATGGCCGGACAGTTCTCAGCTTGGAAAAGGGGTAGAGGGAAGCCTATTGAATCCGTCAATAAGTCATATAAGTTTTATGAAGTTGAATATGCAGGACAAGGAGAAGGAATTGCATATTCTGTTGGTGCCAATTTCTCGACTTACGTGCTTACAGTAAATGCTGGCGAGGATATTACTATGAAGATTATGTCCTTCTCTCAACTGGGACACCGTGCTATATGCATTCTCTCCGCAAATGGCATAGTTTCAAATGTTACGCTTCGTCAACCGACTTCTTCCGGTGGTACTTTAACATATGAGGGACAGTTTGAGATTGTTTCTTTGTCTGGTTCATTTATGCCAACCGAGAATGGATTGACAAAGAGCAGATCCGGTGGGATGAGCGTCTCTTTGGTTGGTCCAGATGGCCGTCTAATGGGTGGTGGACTTGCCGGTTTGCTGGTAGCTGCAGGCCCTGTTCAGGTTGTTGTGGCCAGTTTCCTTCCAAGTCAAGAGCTAGAGCAGAAATCCAAGAAACCAAGGATGGAGCATATATCAAATACTGCCAATACACATGTTAGTCCAATTTCTGCTGAAGAAATGAAAAATAGTTTTGGTGGAGTAAAGCCTATTATGATGACACCTGCTTTTCAAGTTGACAACTATGGTTCTTATAACAATGGACATGGCTCTAGGAACTCATTTCCTGATGATGAAGCTCCTTTAAAAGACAAGGATTCTAACCCCAACCAAGTAGGTGCTGGAGTTGCATGCTAA 1149 0.4883 MEEREIFGSGHVVKGDEARESFHVASRTEDFMQFPGTAELPTVAAELPAVAEEIPAVAAELPAITAELPAVAAEIPAVVAEIPAVAPVSAVVTPATEGKKKRGRPRKYGPDGKVAAVARALSPMPISASIPMAGQFSAWKRGRGKPIESVNKSYKFYEVEYAGQGEGIAYSVGANFSTYVLTVNAGEDITMKIMSFSQLGHRAICILSANGIVSNVTLRQPTSSGGTLTYEGQFEIVSLSGSFMPTENGLTKSRSGGMSVSLVGPDGRLMGGGLAGLLVAAGPVQVVVASFLPSQELEQKSKKPRMEHISNTANTHVSPISAEEMKNSFGGVKPIMMTPAFQVDNYGSYNNGHGSRNSFPDDEAPLKDKDSNPNQVGAGVAC 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0763 382 Gene3D - 177 314 - -
Lal9g0763 382 MobiDBLite consensus disorder prediction 348 382 - -
Lal9g0763 382 SUPERFAMILY AF0104/ALDC/Ptd012-like 175 293 - -
Lal9g0763 382 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 368 IPR039605 GO:0003680
Lal9g0763 382 ProSiteProfiles PPC domain profile profile. 173 316 IPR005175 -
Lal9g0763 382 CDD DUF296 178 266 IPR005175 -
Lal9g0763 382 Pfam Plants and Prokaryotes Conserved (PCC) domain 178 291 IPR005175 -
Lal9g0763 382 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0763 Lal-Chr9 5350412 5356304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0763 84 358 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 48.903 3.83e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0763 - - gmx:102667678 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0763 9 5350412 5356304 Lal9g0763 9 5350412 5356304 ECH
Lal9g0763 9 5350412 5356304 Lal12g0696 12 5197604 5203377 PCT
Lal9g0763 9 5350412 5356304 Lal13g0797 13 5288974 5294217 PCT
Lal9g0763 9 5350412 5356304 Lal24g0618 24 4499313 4504503 PCT
Lal12g0696 12 5197604 5203377 Lal9g0763 9 5350412 5356304 PCT
Lal13g0797 13 5288974 5294217 Lal9g0763 9 5350412 5356304 PCT
Lal24g0618 24 4499313 4504503 Lal9g0763 9 5350412 5356304 PCT