Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0758 ATGGGTTGTTCACTACTACTTTTCTTCACCCTTATCTTAAATCCAACATGGGTTTATGGCAATGATGAACATAAAGCACTCATGGACTTGAAAACCTCTTTAGATCCACAAGACATTTATCTTTCTTCATGGACTATGAATGGAAACTTATGCAATGGTTCCTATGAAGGAGTGGCTTGCAATGAGATGGGTCAAGTTGCAAATATTTCTTTGCAAGGAAAAGGTCTCTATGGGAAGCTATCATCATCCATTGGTGCTCTCAAGCATTTGACAGGACTTTACTTGCATTACAATTCTTTGTATGGAGAGATACCAAGAGAAGTTGCAAACTTGACTCATCTAACTGATGTTTATTTGAATGTTAATCATCTTTCTGGAGAAATCCCACCTCAGATTGGTAACATGGAGAATCTACAAGTTTTGCAGCTTTGCTATAATCACTTGACAGGAAGCATACCTACACAACTTGGTGGTTTGAGAAAGCTTAGTGTTCTTGCTTTGCAATCAAATCAGTTAACTGGTGCTATTCCTGCTAGTCTAGGTGATCTGGGAAAGTTGACGAGAGTAGATTTGAGTTCGAATAATCTCTTCGGTTCCATTCCCACAAGACTAGCTGATGTTCCTTCACTACAAGTTTTGGATGTTCATAACAATACTCTATCTGGGAGTGTACCTCCTGCTCTGAAGAGACTAGATAATGCATTTGTGTATGAAAAGAATTCGGGGTTGTGTGGTGTTGGGTTTTCATCCTTGAAAGCTTGTGGTGCTTCGGATCATGTCAGTTCCACCAGACCCGAGCCTCACGATGCAGGGGTTGATGGCTTAACAAGAAATATCCCAGAAACTGCAAATGTAAAGTTGCCTTGTAATGGAACTTGGTGCCAAAGTTATTCAATATCCAAACAAGCAACGTCTATTAAAATTGGCATAGTTCTGGTTACAATCGCAATGTCAGCTATTGGTATTCTGACATTTGCGCTGTATCGTAGGCGGAAACAACGGCTTGGAAATGCTTTTGACATCTCCGAAAGCCGTCTAAGTACTGATCAAGGCAAGAGTATATACAGGAAGAATGGATCTCCTTTGGTTAGCCTTGAGTACTCTAAAGGATGGGACCCGATGGCCGATTCGAGGACTTTCAATGGGGATAGCCAAGATAAGTTCCAGAATTTCAGGTTCAACTTGGAAGAAGTTGAGTCAGCTACTCAATATTTCTCAGAGTTTAATTTGTTGGGTAAGAGTAACTTCAGTGCAACTTATAAAGGAGTTTTAAGAGATGGATCTGTTGTTTCTGTAAAGACCATCAATAAAACTAGTTGCAAATCAGATGAAGCTGAGTTTTTGAATGGATTGAACATTTTAACCTCACTGCGCAGCGATAATTTAGTGAGATTGAGAGGATTTTGTTGCTCAAGGGGACGAGGTGAATGCTTCCTGATTTATGATTTTGTTTCTAATGGAAATTTGTCGCGCTACCTTGACGCGAAAGAAGGTGTTGGGGAAGTCCTTGAATGGTCTACAAGAGTTTCTATTGCCAAAGGGATTGCTAAAGGTATAGCATATTTACATGCACACAAATCAAACAAACCGTCTCTCGTTCACCAAAACATCTCGGCCGAGAAAGTGCTCATTGATCATCGGTACAATCCATTGGTTTCAGATTCTGGCCTGTACAAGCTTCTCACTAATGACATTGTCTTCTCTGAACTAAAGGCTAGTGCAGCAAAGGGTTACTTGGCTCCTGAATACACCACTACAGGCCGGTTCACAGAGAAAAGTGATGTATATGCTTTTGGTGTGCTTCTCTTCCAGATCCTCACAGGTAAGAAGAAGGTCACTAGCTCAATGCGCCTTGCCGCAGAATCCTTCATGTTCGAAGAATTTATAGACCCGAATCTGCATGGACGATTTTTCGAGTACGAGGCAGCTAAACTTGCGAAAATGGCTTTACTTTGCTCCCATGAGTCTTCTTTTGAGAGGCCAACCATGGAAGCCATTGTTCAAGAACTTAGCAACTGTAGTAGTTGTATATAA 2034 0.409 MGCSLLLFFTLILNPTWVYGNDEHKALMDLKTSLDPQDIYLSSWTMNGNLCNGSYEGVACNEMGQVANISLQGKGLYGKLSSSIGALKHLTGLYLHYNSLYGEIPREVANLTHLTDVYLNVNHLSGEIPPQIGNMENLQVLQLCYNHLTGSIPTQLGGLRKLSVLALQSNQLTGAIPASLGDLGKLTRVDLSSNNLFGSIPTRLADVPSLQVLDVHNNTLSGSVPPALKRLDNAFVYEKNSGLCGVGFSSLKACGASDHVSSTRPEPHDAGVDGLTRNIPETANVKLPCNGTWCQSYSISKQATSIKIGIVLVTIAMSAIGILTFALYRRRKQRLGNAFDISESRLSTDQGKSIYRKNGSPLVSLEYSKGWDPMADSRTFNGDSQDKFQNFRFNLEEVESATQYFSEFNLLGKSNFSATYKGVLRDGSVVSVKTINKTSCKSDEAEFLNGLNILTSLRSDNLVRLRGFCCSRGRGECFLIYDFVSNGNLSRYLDAKEGVGEVLEWSTRVSIAKGIAKGIAYLHAHKSNKPSLVHQNISAEKVLIDHRYNPLVSDSGLYKLLTNDIVFSELKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKKKVTSSMRLAAESFMFEEFIDPNLHGRFFEYEAAKLAKMALLCSHESSFERPTMEAIVQELSNCSSCI 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0758 677 Gene3D Ribonuclease Inhibitor 136 247 IPR032675 -
Lal9g0758 677 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Lal9g0758 677 Gene3D Transferase(Phosphotransferase) domain 1 484 676 - -
Lal9g0758 677 Gene3D Phosphorylase Kinase; domain 1 373 483 - -
Lal9g0758 677 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 675 - -
Lal9g0758 677 ProSiteProfiles Protein kinase domain profile. 405 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0758 677 SUPERFAMILY L domain-like 22 231 - -
Lal9g0758 677 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Lal9g0758 677 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 675 - -
Lal9g0758 677 Pfam Protein tyrosine and serine/threonine kinase 410 670 IPR001245 GO:0004672|GO:0006468
Lal9g0758 677 SUPERFAMILY Protein kinase-like (PK-like) 386 670 IPR011009 -
Lal9g0758 677 Gene3D Ribonuclease Inhibitor 22 134 IPR032675 -
Lal9g0758 677 CDD STKc_IRAK 411 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0758 Lal-Chr9 5303575 5306999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0758 5 518 Miscellaneous Gene Families AT4G22730 54.198 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lal9g0758 PK_Tyr_Ser-Thr 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0758 - - gmx:100789253 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0758 9 5303575 5306999 Lal24g0613 24 4472960 4476477 PCT
Lal24g0613 24 4472960 4476477 Lal9g0758 9 5303575 5306999 PCT