Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0723 ATGAAGGGTGGAAAATCTAAAACCGAAACCAAAAGAGCCGATCCCAAGCTTTCTGTGAATAAGAAAGGTGCTGGTGCTGCAAAACCAGCAAGGAAACCGGCTAAGGGAAAAGCCGCTAAAGATCCTAACAAACCTAAGAGGCCTGCTAGTGCATTCTTTGTTTTCATGGAGGAGTTTAGGAAGCAGTTCAGCAAAGAAAATCCCGACAACAAAGCTGTGTCCGCTGTCGGCAAGGCTGCTGGAGCAAAATGGAAGTCCATGTCCGAAGCTGAGAAAGCACCTTATGTGGCAAAGGCAGAGAAACGGAAGGTGGAGTATGAGAAGAACATGAGAGCCTATAACAAAAAACAGGATGAAGGTCCTGCTGCCGCGGATGAAGAAGAATCTGAGAAATCAATTTCAGAGGTGAATGATGAGGATGATGGAGATGATGATGGAAGTGACGAGGATGATGACGACGACGATGATGATGATGAGTAG 480 0.4604 MKGGKSKTETKRADPKLSVNKKGAGAAKPARKPAKGKAAKDPNKPKRPASAFFVFMEEFRKQFSKENPDNKAVSAVGKAAGAKWKSMSEAEKAPYVAKAEKRKVEYEKNMRAYNKKQDEGPAAADEEESEKSISEVNDEDDGDDDGSDEDDDDDDDDDE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0723 159 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 153 - -
Lal9g0723 159 MobiDBLite consensus disorder prediction 79 159 - -
Lal9g0723 159 SMART hmgende2 44 115 IPR009071 -
Lal9g0723 159 Coils Coil 96 116 - -
Lal9g0723 159 MobiDBLite consensus disorder prediction 131 159 - -
Lal9g0723 159 MobiDBLite consensus disorder prediction 1 18 - -
Lal9g0723 159 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 153 IPR031061 -
Lal9g0723 159 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lal9g0723 159 CDD HMGB-UBF_HMG-box 45 111 - -
Lal9g0723 159 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lal9g0723 159 MobiDBLite consensus disorder prediction 1 49 - -
Lal9g0723 159 MobiDBLite consensus disorder prediction 94 130 - -
Lal9g0723 159 Gene3D High mobility group box domain 29 130 IPR036910 -
Lal9g0723 159 SUPERFAMILY HMG-box 36 118 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0723 Lal-Chr9 5005531 5007922 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lal9g0723 HMG_box 6.2e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0723 K25507 - lang:109352139 217.238