Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0712 ATGATGACTTCTAGAGGCTATTATTCTTCTCCTATTGCTAATTCTTCAAACTCTTCTGATTGTTGTTCCAATAGATCTAATGGGTCAGCTTCAGTTTCAGCTTCAGCTGAGCTTAAAATCTATAGAGCTTTCATATTTTCAGTTCCAATATTCTTCACTTTCATTCTCCTTTTTCTTTTCTATATTTTCTATCTTAGACCTCGAAGGGTTGATTGGTCCTCTCTTAGGATGAGAGCACTTTCACTTCCACATAACAATACCATCTCAACGTCTGATATGGGGTTGAAGAAAGAATTGAGAGAGATGCTGCCGATTATTGTATACAAGGAAAGCTTTTCGGTTAAAGATACTCAATGCGCAGTATGCCTTTTGGAATACCAAGCAGATGATAAGCTTCAACAGATACCTGCATGTGGCCATACATTTCACATGAGCTGCATCGATCTCTGGCTTGCCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTCCTAACTTTTTCTACGTCTTCAACCGAGACATCTAACATACAGATGTCACAGAGCAATGAAGAAACACAAGCTACAGAGTTGTCAGAATCAAGATCTACTAGGCCTCTAGAAACCACTGTCTCTGGAGAAGTTGCAACCAATGCTCACTGCATTGATGTTGAAGGACAGAATGCACTAAACAATCAATAG 681 0.4053 MMTSRGYYSSPIANSSNSSDCCSNRSNGSASVSASAELKIYRAFIFSVPIFFTFILLFLFYIFYLRPRRVDWSSLRMRALSLPHNNTISTSDMGLKKELREMLPIIVYKESFSVKDTQCAVCLLEYQADDKLQQIPACGHTFHMSCIDLWLANHSTCPLCRLSLLTFSTSSTETSNIQMSQSNEETQATELSESRSTRPLETTVSGEVATNAHCIDVEGQNALNNQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0712 226 Pfam Ring finger domain 118 161 IPR001841 -
Lal9g0712 226 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 3 189 - -
Lal9g0712 226 MobiDBLite consensus disorder prediction 1 20 - -
Lal9g0712 226 SUPERFAMILY RING/U-box 103 167 - -
Lal9g0712 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 166 IPR013083 -
Lal9g0712 226 MobiDBLite consensus disorder prediction 174 204 - -
Lal9g0712 226 CDD RING-H2_EL5_like 118 161 - -
Lal9g0712 226 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Lal9g0712 226 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 3 189 - -
Lal9g0712 226 SMART ring_2 119 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0712 Lal-Chr9 4919313 4922390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0712 33 184 C3H Transcription Factor Family AT4G10150 59.259 1.15e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0712 K19039 - gmx:100794211 242.662