Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0710 AAACAAAGCGAGTTTGATAGAACAAACATAAAGAAAGGACCATGGAGTGTTGAAGAAGATGAGGTATTGTTAAAGCATGTTAACAAGTATGGTCCAAGGGATTGGAGCTCCATTCGAACCAAAGGCTTGTTGCATCGAACTGGAAAATCTTGTCGCCTTAGATGGGTTAATAAGCTTAGACCAGATTTGAAGTCTGGGTGTAAGTTTTCAGCAGAGGAAGAGAGAGTGGTGATAGAATTACAAGCAGAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGAAGAACTGATAATGATGTGAAAAACTTCTGGAGTAGCAGGAGGAAAAGGTTGGAGAGGATATTGAAGAGGTCATCACCATCAAAGCCTGAGAAACACAAAGGAAAAACTCCTCTTAACCAATTACAAGTGGAAGAGGTTCTTGAATGCAGTTCCAATCAGCTAGAAGAAAACTACACTTCTTACCCTGCTTCTTATATAGTGAACACTGAGGAGATCAAGATGGTTCATCTACCAGATTTGACAAAACCAAACTACCAAAACCAATATTTGGAAAATGATCTCAATGCAATGGATGTTAAGGCTACCTCATTTCATATGGTACCAGAACCATCATTTGCATCTTCATCAGGGTACAATTGTCATCAAATTCCTGAACCACAAATGGATTTTACATTATTCCCAGGGTGCCATGACCTTGCACCAGAGCCCTTTGACCCTAACTTTATTGACATCTTTGAGGTGAAAAATTGTTCAGAATGTGTAAGCAATCAGAAGTTTGTGACCAAGTTGCCAACTCTTGGATTAGAGGGAAGTTGTCAAAATACTATTCCAAATGGATTCTTTGAGGAATTCCCAACTGAGATGTTGGATTATTTTGAGCATGTTCCAACCTCAGCTGAACAAAAAACTCCCAAAGTCTGTACCAAATATAAAAAATCATGA 954 0.3868 KQSEFDRTNIKKGPWSVEEDEVLLKHVNKYGPRDWSSIRTKGLLHRTGKSCRLRWVNKLRPDLKSGCKFSAEEERVVIELQAEFGNKWAKIATYLEGRTDNDVKNFWSSRRKRLERILKRSSPSKPEKHKGKTPLNQLQVEEVLECSSNQLEENYTSYPASYIVNTEEIKMVHLPDLTKPNYQNQYLENDLNAMDVKATSFHMVPEPSFASSSGYNCHQIPEPQMDFTLFPGCHDLAPEPFDPNFIDIFEVKNCSECVSNQKFVTKLPTLGLEGSCQNTIPNGFFEEFPTEMLDYFEHVPTSAEQKTPKVCTKYKKS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0710 317 PANTHER MYB TRANSCRIPTION FACTOR 6 305 - -
Lal9g0710 317 SMART sant 11 61 IPR001005 -
Lal9g0710 317 SMART sant 65 113 IPR001005 -
Lal9g0710 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Lal9g0710 317 Gene3D - 4 65 - -
Lal9g0710 317 Gene3D - 67 139 - -
Lal9g0710 317 PANTHER TRANSCRIPTION FACTOR DUO1 6 305 - -
Lal9g0710 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 63 IPR017930 -
Lal9g0710 317 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Lal9g0710 317 CDD SANT 68 107 IPR001005 -
Lal9g0710 317 CDD SANT 14 59 IPR001005 -
Lal9g0710 317 SUPERFAMILY Homeodomain-like 9 107 IPR009057 -
Lal9g0710 317 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Lal9g0710 317 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Lal9g0710 317 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0710 Lal-Chr9 4899225 4901081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0710 1 118 MYB Transcription Factor Family AT3G60460 78.814 1.06e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal9g0710 Myb_DNA-binding 6.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0710 K09422 - gmx:121173231 399.438