Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0697 ATGATTGTTGATGGTGTTCATTGTTTTATTGTTCTTGATATCTGGTTTGTTATGGACAAGGGAACGCCACCTAGCCTCTTTGTTAATGATGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGACAAGGGAAAGAATGCCAAATTAGAGGAGTCTAAACCAGTTAAAGTTGTTTCAGGATCCTTGACTTCTCCCTCCATTCGTAGGGCTAATGATACACAGAAACCTTCTCAGGCTGGTTCAGGTGGCAAGCTTGCTTTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCACCCCCTGTTAAGTTAGCAGATGATGATGAAGAAGAAACGGATGCTGGGGATGTTTCAAATGATGCACCACTGAAACGGCAAAAATTGGGCCAGGAGGATGGCACCGAGCAGTCATTGAGACATCTTGATGTTGCACCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGCCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATAAAAAATGTGCTGAATACAAATATTATGAACATCGGCTTGCTCAAGAGGAAAAGGCTTTTGCACAGTCCATGGAACCACAGGCACATCACACTGAGGGTACAAACATTTCATCTTCCAGGCCGTCAAATGGTCCTCAGAGGTCATCTCAACAACATTCAACCTACCAAATCCCTGCTTCTGTTTTATATGGACGTAATGAAGAACCGTGGTCTTCTGGATCTTCAGTTCAAGCATCGTCTGCAGGAAGCACTAATGAACCCAGTGGATCATCCAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAGGGCTGCACAGGAAGAGAGGTCCAGGCGACCTAAGTATTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCAGCTTCTGGGAAGAAAGGTCATCACATGGGGGATTACATTCCCCTAGAAGAACTTGAGAAGTTCATGGCTACCTGTAATGACGCAGCAGCACAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCTAAAATTCAGGCTGATAATGTTGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGCAGCTCCAGGAAGGGTATTGCAGATCCTATCATGGCAGGCAGTGTTAAGAAAGATAACTTGGGGGTTGGTGCTGTCCAACCTGGGGAAGTGACTGCTGAGGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTCGGCTATCGCCACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1350 0.4452 MIVDGVHCFIVLDIWFVMDKGTPPSLFVNDGSFMERFKQLQQEQDKGKNAKLEESKPVKVVSGSLTSPSIRRANDTQKPSQAGSGGKLAFSLKQKSKLVPPPVKLADDDEEETDAGDVSNDAPLKRQKLGQEDGTEQSLRHLDVAPSSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDKKCAEYKYYEHRLAQEEKAFAQSMEPQAHHTEGTNISSSRPSNGPQRSSQQHSTYQIPASVLYGRNEEPWSSGSSVQASSAGSTNEPSGSSNADSLALMEFYMKRAAQEERSRRPKYSKDEMPPPASLQAASGKKGHHMGDYIPLEELEKFMATCNDAAAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRKGIADPIMAGSVKKDNLGVGAVQPGEVTAEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 449
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0697 449 ProSiteProfiles SURP motif repeat profile. 157 200 IPR000061 GO:0003723|GO:0006396
Lal9g0697 449 Pfam G-patch domain 367 410 IPR000467 GO:0003676
Lal9g0697 449 ProSiteProfiles G-patch domain profile. 366 413 IPR000467 GO:0003676
Lal9g0697 449 MobiDBLite consensus disorder prediction 60 84 - -
Lal9g0697 449 MobiDBLite consensus disorder prediction 258 284 - -
Lal9g0697 449 SUPERFAMILY Surp module (SWAP domain) 139 207 IPR035967 GO:0003723|GO:0006396
Lal9g0697 449 SMART G-patch_5 364 411 IPR000467 GO:0003676
Lal9g0697 449 MobiDBLite consensus disorder prediction 298 328 - -
Lal9g0697 449 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 19 449 IPR040169 -
Lal9g0697 449 MobiDBLite consensus disorder prediction 40 55 - -
Lal9g0697 449 MobiDBLite consensus disorder prediction 210 245 - -
Lal9g0697 449 Gene3D Surp module 129 213 IPR035967 GO:0003723|GO:0006396
Lal9g0697 449 MobiDBLite consensus disorder prediction 118 139 - -
Lal9g0697 449 MobiDBLite consensus disorder prediction 257 284 - -
Lal9g0697 449 Pfam Surp module 156 206 IPR000061 GO:0003723|GO:0006396
Lal9g0697 449 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 19 449 - -
Lal9g0697 449 MobiDBLite consensus disorder prediction 40 154 - -
Lal9g0697 449 SMART surpneu2 155 209 IPR000061 GO:0003723|GO:0006396
Lal9g0697 449 MobiDBLite consensus disorder prediction 218 245 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal9g0697 Lal-Chr9 4810901 4815784 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0697 295 449 C2H2 Transcription Factor Family AT5G26610 28.409 2.95e-09 56.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0697 K13096 - gmx:100786213 651.358
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0697 9 4810901 4815784 Lal9g0697 9 4810901 4815784 ECH