Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal9g0697 | ATGATTGTTGATGGTGTTCATTGTTTTATTGTTCTTGATATCTGGTTTGTTATGGACAAGGGAACGCCACCTAGCCTCTTTGTTAATGATGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGACAAGGGAAAGAATGCCAAATTAGAGGAGTCTAAACCAGTTAAAGTTGTTTCAGGATCCTTGACTTCTCCCTCCATTCGTAGGGCTAATGATACACAGAAACCTTCTCAGGCTGGTTCAGGTGGCAAGCTTGCTTTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCACCCCCTGTTAAGTTAGCAGATGATGATGAAGAAGAAACGGATGCTGGGGATGTTTCAAATGATGCACCACTGAAACGGCAAAAATTGGGCCAGGAGGATGGCACCGAGCAGTCATTGAGACATCTTGATGTTGCACCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGCCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATAAAAAATGTGCTGAATACAAATATTATGAACATCGGCTTGCTCAAGAGGAAAAGGCTTTTGCACAGTCCATGGAACCACAGGCACATCACACTGAGGGTACAAACATTTCATCTTCCAGGCCGTCAAATGGTCCTCAGAGGTCATCTCAACAACATTCAACCTACCAAATCCCTGCTTCTGTTTTATATGGACGTAATGAAGAACCGTGGTCTTCTGGATCTTCAGTTCAAGCATCGTCTGCAGGAAGCACTAATGAACCCAGTGGATCATCCAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAGGGCTGCACAGGAAGAGAGGTCCAGGCGACCTAAGTATTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCAGCTTCTGGGAAGAAAGGTCATCACATGGGGGATTACATTCCCCTAGAAGAACTTGAGAAGTTCATGGCTACCTGTAATGACGCAGCAGCACAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCTAAAATTCAGGCTGATAATGTTGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGCAGCTCCAGGAAGGGTATTGCAGATCCTATCATGGCAGGCAGTGTTAAGAAAGATAACTTGGGGGTTGGTGCTGTCCAACCTGGGGAAGTGACTGCTGAGGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTCGGCTATCGCCACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA | 1350 | 0.4452 | MIVDGVHCFIVLDIWFVMDKGTPPSLFVNDGSFMERFKQLQQEQDKGKNAKLEESKPVKVVSGSLTSPSIRRANDTQKPSQAGSGGKLAFSLKQKSKLVPPPVKLADDDEEETDAGDVSNDAPLKRQKLGQEDGTEQSLRHLDVAPSSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDKKCAEYKYYEHRLAQEEKAFAQSMEPQAHHTEGTNISSSRPSNGPQRSSQQHSTYQIPASVLYGRNEEPWSSGSSVQASSAGSTNEPSGSSNADSLALMEFYMKRAAQEERSRRPKYSKDEMPPPASLQAASGKKGHHMGDYIPLEELEKFMATCNDAAAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRKGIADPIMAGSVKKDNLGVGAVQPGEVTAEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY | 449 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal9g0697 | 449 | ProSiteProfiles | SURP motif repeat profile. | 157 | 200 | IPR000061 | GO:0003723|GO:0006396 | |
Lal9g0697 | 449 | Pfam | G-patch domain | 367 | 410 | IPR000467 | GO:0003676 | |
Lal9g0697 | 449 | ProSiteProfiles | G-patch domain profile. | 366 | 413 | IPR000467 | GO:0003676 | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 60 | 84 | - | - | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 258 | 284 | - | - | |
Lal9g0697 | 449 | SUPERFAMILY | Surp module (SWAP domain) | 139 | 207 | IPR035967 | GO:0003723|GO:0006396 | |
Lal9g0697 | 449 | SMART | G-patch_5 | 364 | 411 | IPR000467 | GO:0003676 | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 298 | 328 | - | - | |
Lal9g0697 | 449 | PANTHER | ARGININE/SERINE RICH SPLICING FACTOR SF4/14 | 19 | 449 | IPR040169 | - | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 40 | 55 | - | - | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 210 | 245 | - | - | |
Lal9g0697 | 449 | Gene3D | Surp module | 129 | 213 | IPR035967 | GO:0003723|GO:0006396 | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 118 | 139 | - | - | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 257 | 284 | - | - | |
Lal9g0697 | 449 | Pfam | Surp module | 156 | 206 | IPR000061 | GO:0003723|GO:0006396 | |
Lal9g0697 | 449 | PANTHER | SURP AND G PATCH DOMAIN-CONTAINING 1 | 19 | 449 | - | - | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 40 | 154 | - | - | |
Lal9g0697 | 449 | SMART | surpneu2 | 155 | 209 | IPR000061 | GO:0003723|GO:0006396 | |
Lal9g0697 | 449 | MobiDBLite | consensus disorder prediction | 218 | 245 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal9g0697 | Lal-Chr9 | 4810901 | 4815784 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal9g0697 | 295 | 449 | C2H2 Transcription Factor Family | AT5G26610 | 28.409 | 2.95e-09 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal9g0697 | K13096 | - | gmx:100786213 | 651.358 |