Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0684 ATGAATGATGATAGACAAATGGGGTTGCATTATGTAGATAATGGTTTTCCTTATGCTGTTAATGAAAGCTTCACAGGTTTCTATCCACATGTTCCTCTCAATTATGCTTATGCTGGCTCAATGCCTGATCAGGAAAGTGTCTACTGGTCAATGAATATGAATCCATATAAGTTTGGATTGACTGGCCCTGGGAGCACATCTTATTATGGTTGTTATGAGGTAAATGGTCATTTGCCAAGAATGGAGATCAACAGGGCAGAGTGGGAATACCCTTCTGTAATGATCACTGAGGAACCTGCTTCAACAGAATCTCCACCTGAAAGAGATGGAGTTACGAATATGCAGAGTTTGCAGACTATTCCTGAAGAATGCAGTCCAAATAATCATGAATCCAATATTAGCCAGGTCATATGGCAAGACAACATTGATCCTGATAATATGACTTATGAGGAACTACTGGACCTGGGAGAGGCTATTGGAACTGAAAGCAGGGGTCTTTCCCAAGAACTTATTGATATGCTTCCAACTTCGAAGTACAAATTCGGTAGCTTATTCAAAAGAAAAAGTTCTGGAAAAAGGTAA 582 0.3969 MNDDRQMGLHYVDNGFPYAVNESFTGFYPHVPLNYAYAGSMPDQESVYWSMNMNPYKFGLTGPGSTSYYGCYEVNGHLPRMEINRAEWEYPSVMITEEPASTESPPERDGVTNMQSLQTIPEECSPNNHESNISQVIWQDNIDPDNMTYEELLDLGEAIGTESRGLSQELIDMLPTSKYKFGSLFKRKSSGKR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0684 193 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 193 IPR033276 GO:0004842|GO:0016567|GO:0046621
Lal9g0684 193 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0684 Lal-Chr9 4731905 4738161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0684 10 193 C3H Transcription Factor Family AT3G63530 51.596 1.16e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0684 K19045 - gmx:100785290 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0684 9 4731905 4738161 Lal9g0684 9 4731905 4738161 ECH