Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0670 ATGGAAAAATTGTATTCATCTCTTGTTTTTGTTTTTCTTTGCCTTAGTGGCATTTCTCTCATTGAGGCTCTACCCTTTGGTGTGGAACTCATTCACCGTGAATCTTCAAAATCGCCATTTTATGTCTCTACCGAAACTCATTTCCAACGAGTTACTAATGCTATTCGTCGTTCCATAAACCGTCCTAATCATTTCAAACAAAGTCGTTTGTTGCCGAACGATGCTGAGTCTGATGTATTTGCTAATCGAGGTGAATACCTAATGAGTTACTCAATAGGAACCCCACCAGTTAAAACCTTAGGTATTGTTGACACAGGTAGTAACATTATTTGGTTGCAATGCAAGCCTTGTCGCCCATGTTACACACAAACCTCTCCAATATTTGACCCCTCAAAATCCAAGACATACCGATTCCTTCCTTGCACTTCTAATGCTTGTGAATCGAATAGAGATACTTCTTGCTCTTCAAATAGTAAAAGTTGTCAATATACTATCCGATATGGGGATAATTCAACATCACAAGGAGATCTAAGTTCAGATACTTTTACTTTAAGTTCCACAACGGGCTCTCCTCTCCGATTACGTAACACTGTGATCGGATGTGGACATCGTAATACCTTGGTTTTTCAAGGTGATGGCTCTGGCATCGTTGGTCTTGGAATTGGACCTTCGTCACTTATAACTCAACTTGGTACTTCAATAGAAGGCAAATTCTCGTATTGTTTGTTGCCATTATTTTCACAGCCTAACATCTCAAGCATACTCATTTTTGGAGACAATGATGATGCCTTTTCTAGTGAAAGTACTGTCTCAACTCCAATAGTCCCAGATGCTGATTTTTACAGACTAAACTTGTTAAGTTTTACTGTGGGAGACAGCAAAATAGAATTTGAAAGTTCTAGTGACGGTAACATCATAATTGACTCAGGAACGACATTGACTCTTTTACCACCTGATGTTTACTCTGAATTGGAATCAGTAGTAGCATCTGCAATTCCACAAGAGCGCATCGAAGACCCTTCAGGAACATTGAGCCTTTGCTACAAATCTAGTTCACTTCGAAATTCGGATATTCCAATAATCACAGCAAATTTTGATGGTGCAGATGTCAAATTGAATGCTCTCAACACATTTGTTGAAGTTAGTGAGGGTATTACATGTTTTGTTTTCATCCCATCCTCATTTCCCATCTTTGGAAATTTGGCACAACAAAACTTTTTGATTGGCTATGATGTTCAAAATCAAGTTCTCAAATTCAAGCCCACTGATTGCAGCAAACTATGA 1284 0.3855 MEKLYSSLVFVFLCLSGISLIEALPFGVELIHRESSKSPFYVSTETHFQRVTNAIRRSINRPNHFKQSRLLPNDAESDVFANRGEYLMSYSIGTPPVKTLGIVDTGSNIIWLQCKPCRPCYTQTSPIFDPSKSKTYRFLPCTSNACESNRDTSCSSNSKSCQYTIRYGDNSTSQGDLSSDTFTLSSTTGSPLRLRNTVIGCGHRNTLVFQGDGSGIVGLGIGPSSLITQLGTSIEGKFSYCLLPLFSQPNISSILIFGDNDDAFSSESTVSTPIVPDADFYRLNLLSFTVGDSKIEFESSSDGNIIIDSGTTLTLLPPDVYSELESVVASAIPQERIEDPSGTLSLCYKSSSLRNSDIPIITANFDGADVKLNALNTFVEVSEGITCFVFIPSSFPIFGNLAQQNFLIGYDVQNQVLKFKPTDCSKL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0670 427 SUPERFAMILY Acid proteases 81 425 IPR021109 -
Lal9g0670 427 ProSiteProfiles Peptidase family A1 domain profile. 86 420 IPR033121 -
Lal9g0670 427 Pfam Xylanase inhibitor C-terminal 281 420 IPR032799 -
Lal9g0670 427 Pfam Xylanase inhibitor N-terminal 86 259 IPR032861 -
Lal9g0670 427 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Lal9g0670 427 PRINTS Pepsin (A1) aspartic protease family signature 253 266 IPR001461 GO:0004190|GO:0006508
Lal9g0670 427 PRINTS Pepsin (A1) aspartic protease family signature 305 316 IPR001461 GO:0004190|GO:0006508
Lal9g0670 427 CDD pepsin_A_like_plant 85 424 IPR034161 -
Lal9g0670 427 Gene3D Acid Proteases 262 427 IPR021109 -
Lal9g0670 427 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 4 425 - -
Lal9g0670 427 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 305 316 IPR001969 GO:0004190|GO:0006508
Lal9g0670 427 PANTHER OS07G0603500 PROTEIN-RELATED 4 425 - -
Lal9g0670 427 Gene3D Acid Proteases 67 259 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0670 Lal-Chr9 4613633 4614916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0670 84 427 Miscellaneous Gene Families AT1G44130 24.000 2.46e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0670 - - gmx:100789696 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0692 1 4570399 4573065 Lal9g0670 9 4613633 4614916 LSH