Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0661 ATGAAAACCCTAGGTGCATATATAAAAACGCTTCCTCTGAAACCAACACCTCCACCGCTGCGAAGTGCTGAGAATTCAAATCGATTTGCAATGGCTTCAGAGAAGAAACTATCGAACCCTATGAGGGAAATCAAGGTTCAGAAGCTCGTTCTCAATATCTCTGTTGGTGAGAGTGGAGATCGTCTCACCAGAGCTGCAAAGGTGTTGGAACAGCTTAGTGGCCAAACCCCTGTTTTTTCTAAAGCAAGGTACACTGTCCGTTCTTTTGGAATTCGAAGAAATGAAAAAATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTTTGAAGGTGAAGGAATACGAACTTCTCCGAAGAAACTTCAGTGATACTGGATGTTTTGGCTTTGGTATTCAGGAGCATATCGATTTGGGAATCAAGTATGATCCTTCAACCGGTATTTATGGAATGGACTTCTATGTTGTTTTGGAACGCCCTGGTTACCGTGTTGGACGTCGTCGTCGCTGCAAGGCTCGTGTTGGGATCCAGCATCGTGTTACAAAGGAAGATGCTATGAAGTGGTTCCAAGTGAAATATGAAGGTGTGATCCTGAACAAGTCGCAGAATATCTCTTAG 636 0.4387 MKTLGAYIKTLPLKPTPPPLRSAENSNRFAMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0661 211 Gene3D - 31 207 IPR022803 -
Lal9g0661 211 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 21 202 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lal9g0661 211 PANTHER 60S RIBOSOMAL PROTEIN L11-1 19 210 - -
Lal9g0661 211 SUPERFAMILY RL5-like 38 203 IPR022803 -
Lal9g0661 211 Pfam Ribosomal protein L5 39 92 IPR031310 -
Lal9g0661 211 Pfam ribosomal L5P family C-terminus 96 194 IPR031309 -
Lal9g0661 211 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 19 210 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lal9g0661 211 ProSitePatterns Ribosomal protein L5 signature. 69 85 IPR020929 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0661 Lal-Chr9 4545389 4548100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0661 31 211 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 96.685 2.27e-131 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0661 K02868 - thj:104806164 340.117