Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0648 ATGAGAAATGTTCCGTCACGCAGCCACCCTCTCAATAGTTTTTTCCTAACTGGAAATGACTTACTTGATTCGTTGACTTGGTTTCTGTTCTTTCCACTTTTCAGTACCCTTGAAATCATCAGGCAGAAATCTGTTATAGTTATGGATATAGATCTTAGATTACCTTCTGGTGAACATGATAAAGAGGATCAAGAAACAAATACAATTGATAACCTATTGGATACAGAAGATAAATTGCGCAATGGTGATATAGAGGGAAGAAGTATGGTTGATGCTTGTGTTGAGGTACATCCTCTAGATGGCGGAGACTTGAATTCGCCCACAGTAGATATGGTAATGTTTAAGGAAGAAGCAAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCGTATTCTTTCTACCAAGAATATGCTCGATCAATGGGATTCAACACTGCAATACAAAATAGCCGCCGATCAAAAACGTCAAGAGAATTTATAGATGCAAAGTTTGCCTGTTCCAGATACGGAACAAAACGAGAGTATGAAAAATCAGTAAATCGCCCGCGTGCCAGGCAGAACAATCAAGAATCTGAAAATTCAACTGGTCGGAGATCTTGTTCAAAGATCGACTGTAAAGCAAGCATGCATGTAAAAAGAAGGTCGGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAACAAACTAGAAAAATGTACGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGCACGAGAAAAACCCATTTGATAAAGGCCGGAATTTGGGCCTGGAGTCAGGAGAGGCCAAACGTATGCTTGAGTTTTTTACTCAGATGCAAAATATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAGGATCTACGCCTGAAAAGTCTTTTGTGGGTTGATGCTAAAAGTAGGCATGACTATATCAACTTTTGTGATGTTGTGTCTTTTGACAGCACCTATGTTAGAAACAAGTATAAGATGCCGCTGGTACTTTTTGTTGGAGTGAATCAGCACTATCAATTTATATTACTTGGTTGTGCCTTGATATCAGACGAAAGTGCCACCACTCTTTCTTGGCTTATGCGGACATGGCTGAAAGCTGTTGGTGGTCATGTTCCGAAAGTGATAATTACTGACCATGACAAGACTTTAAAGTCAGTTGTGTCAGATATCTTTCCGAATTCACATCATTGTGTATGTTTATGGCATATATTGGGGAAGGTTCTTGAAAATTTGGCTCATGTAATCAAAAGACATGAAACTTTTATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACAAGTGATGAATTTGAGAAGAGGTGGTGGAAAATTGTTGATCGATTTGAACTCCAGGAGGATGAATGCATGCAGTCACTGTATGAAGATCGCAAGTTATGGGCACCAACATTCATGAAGAACATTTTCTTAGGTGGTATGTCCACTGTCCAGCGATCTGAAAGTGTAAATTCCTTCTTCGATAAATATGTTCATAAGAAGACCTCTGTGCAAGATTTTGTCAAACAGTATGAAGCAATCTTGCAAGACAGATATGAGGAGGAAGCAAAAGCAGATTGTGATACTTGGAATAAAGTGGCAACATTAAAAACTCCCTCACCTTTAGAGAAGAGCGTTGCAGGGGTTTGCACCCATGCAGTATTCAAGAAGATTCAAGCTGAGGTTATTGGTGCTGTTGCTTGTCACCCGAAAAGTGAAGGACAGGATGGCACAGGCATTACTCACATGGTTCATGATATGGAAACAAATCAAGACTTCATAGTTGGGTTAAATAACATAAGATCGGAGGTATCATGTATATGTCGTCTATTTGAATATAGAGGTTATCTTTGTCGACATGCATTGGTTGTTCTTCAATATTCTGGTCAGTCGGTGATGCCATCCCAATATATTTTGAAGCGGTGGACAAAGGATGCGAAGATGAGGCATATGATGGGAGAAGAATCTGAACATATGCTATCTAGGGGGCAACGGTACAATGAGTTATGTCAGCGAGCACTGAAACTGAGTGAAGAAGGATCCCTGTCTCAAGAGAGTTACAGCATTGCATTCCATGCACTACATGAAACATACAAAAATTGTGTGAGTGTAAACAGTTCTAGTAAGAGTCCTACGGAAGCTGGAACGTCGGCTGTTCATGGCCAGCTTTCTACAGAAGAAGATACCCAGAGTAGAAATATGGGCAAGCCAAGCAGAAAGAAAAATCCAACCAAAAAGAAAAAGTTGAGCTGTGAGCCTGAAGTGATGAATGCTGGGGCAGTAGATAACTTGCAACAAATGGATAAATTCAATGCAAGAGCAGCTGTAACCCTCGATGGTTATTATGGCGCACAACAGAATGTTCAGGGAATGTTGAACTTAATGGGACCGACGCGTGATAATTACTTTGGGAATCAACACACTATTCAGGGGCTGGGATCAATGAGTTCCATACCACCAAGCCAAGATGGTTATTATGGTGCACATCAGAGCATGCCCGGTCTGGCGCAACTGGATTTTTTGCGAACAGGTTTCGCATATGGCATGCGGGATGATCCTAATGTTAGAGCAGCACAATTGCATGAGGATCAATCAAGACACACATGA 2673 0.407 MRNVPSRSHPLNSFFLTGNDLLDSLTWFLFFPLFSTLEIIRQKSVIVMDIDLRLPSGEHDKEDQETNTIDNLLDTEDKLRNGDIEGRSMVDACVEVHPLDGGDLNSPTVDMVMFKEEANLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYEKSVNRPRARQNNQESENSTGRRSCSKIDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKHEKNPFDKGRNLGLESGEAKRMLEFFTQMQNMNSNFFYAVDLGEDLRLKSLLWVDAKSRHDYINFCDVVSFDSTYVRNKYKMPLVLFVGVNQHYQFILLGCALISDESATTLSWLMRTWLKAVGGHVPKVIITDHDKTLKSVVSDIFPNSHHCVCLWHILGKVLENLAHVIKRHETFMAKFEKCIYRSWTSDEFEKRWWKIVDRFELQEDECMQSLYEDRKLWAPTFMKNIFLGGMSTVQRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKADCDTWNKVATLKTPSPLEKSVAGVCTHAVFKKIQAEVIGAVACHPKSEGQDGTGITHMVHDMETNQDFIVGLNNIRSEVSCICRLFEYRGYLCRHALVVLQYSGQSVMPSQYILKRWTKDAKMRHMMGEESEHMLSRGQRYNELCQRALKLSEEGSLSQESYSIAFHALHETYKNCVSVNSSSKSPTEAGTSAVHGQLSTEEDTQSRNMGKPSRKKNPTKKKKLSCEPEVMNAGAVDNLQQMDKFNARAAVTLDGYYGAQQNVQGMLNLMGPTRDNYFGNQHTIQGLGSMSSIPPSQDGYYGAHQSMPGLAQLDFLRTGFAYGMRDDPNVRAAQLHEDQSRHT 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0648 890 MobiDBLite consensus disorder prediction 179 204 - -
Lal9g0648 890 Pfam SWIM zinc finger 627 649 IPR007527 GO:0008270
Lal9g0648 890 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 96 825 - -
Lal9g0648 890 ProSiteProfiles Zinc finger SWIM-type profile. 615 651 IPR007527 GO:0008270
Lal9g0648 890 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 96 825 IPR031052 GO:0006355
Lal9g0648 890 MobiDBLite consensus disorder prediction 726 775 - -
Lal9g0648 890 Pfam FAR1 DNA-binding domain 136 238 IPR004330 -
Lal9g0648 890 SMART 26again6 626 653 IPR006564 GO:0008270
Lal9g0648 890 MobiDBLite consensus disorder prediction 726 753 - -
Lal9g0648 890 Pfam MULE transposase domain 335 427 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0648 Lal-Chr9 4461304 4465165 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal9g0648 FAR1 3.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0648 - - gmx:100817034 1471.83