Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0634 ATGAATAATTTAAAAAAGAGAGAAATCTACTTACTCTTTAGTCATTCAATCTTGACAATTCAAATCATTGTGTACCTTCTCACCAATCTCTTGCAGCTTCAGCAACTGAGCGATAAACACTCTCACGAGATAAAAAAACGTTCAGGGTTTATAATGGAAGAAGGGTTGTGCCCAAGTTCAGTTTTTTCATCAGGTTCAGTTGATAAGTCAAGGATTATAGAGGTTAAACCTTTGCGTAGTTTGGCACCACTTATTCCAAAATCTGCTCAAGGTTCTGCCTCTGGGTTTTCTCCCTTCCTCCCAATTGGCGAACCTCGCGAAACTCAAGCACCACCTGTTCCAAATGCAGCTCCAATAAGGTCCTTTAAGAACCCAACTGTTGAAGACGAAACCCTGAATAGAGCCGCCAATGGGCATATTCCTTCGCCACCACAGCATATTCCTTCGGCACCACATCATATTCCCAACCCAACTCCGTTGAGGTCGTATAAGAGCCCGCTCGTTGATGAAGAGACCCCATATGGAGCCAATAGTGATACTTCTTCGTCAGTGGATGGTGGGCTCAATGGTCATGGTAACAGTCATGACCAAAAGCGTGCAGCACTGCAATCGCAGAGCCGCAAATCATCCCAAAAGAAGATTAGAAAGATTCAAGAGCAGTCTGATAATGATGGTGGTCGTGAATCGGTTAATTCTGTACTCATGACATTTGATTCAATACGAAGAAGGCTATGTCAACTCGAAGATGCCAACCAGCTGGACACACAAAATGCAATCAAGCGTGCAGATTTAAGAGCAAACAATGCTATGACATTTAAAGGGATTCGAACGAACTCAAGGAAGAGAGTAGGAGTAGCACCCGGGGTTGAGATTGGGGACATCTTCTTTTTTAGGATAGAATTATGTCTTGTAGGTTTACATGGTCAATCAATGAGTGGGATTGACTATGTGAATATAAAGTGTGAGGATAAGGATCTACCTGTGGCTTTAAGCATTGTTTCATCTGGAGTATACGATGATGATGCAGAGGACAACGATATTCTAATTTATAGTGGTCAGGGTGAGCATTTCAACAAGAAAGATAAGCACATTGTCGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGATAGAAGTTCGCAACAACACAATGAAATAAGAGTCATCCGGGGTTTGAGAGATGTTGGGAATAAAAGTGTGAAAATCTATGTCTACGACGGTTTGTATAAAATCCAAGATTCTTGGACAGAAAAGGGACAATCTGGCGGTGGCATATTTAAGTATAAGTTTGTGAGATTGCCTGGACAACCCAGTGCGTTTGCTAACTGGAAAATGGTTCAGAAGTGGAAGGCAGGCTTACTTTCAAGGAGTGGCCTTATTCTTGCAGACCTCTCCACAGGAGTTGAGAGTATTCCTGTATCACTCATCAATGATGTTGACAATGAGAAGGGCCCTGCTTTTTTTACTTATTTATGTTCTCTCAGACATTCAAAACCATATGGTTTGATGCAACCTTCACATGGCTGCAGCTGTAGTAAAGCATGTACTCCAGGTTGTCCAAATTGCTCTTGCATTCAAAGAAATGGCGGTGATTTTCCATATATTGCAAATGGTATTCTAGTAAGTCGTAAGCAAATGATTTACGAATGTGGCCCTATGTGCCAGTGTCTTCCTAACTGCAAAAATCGAGTATCCCAATCTGGTTTAAAGCTTCACATGGAAGTGTTCAGAACAAAGGATAGAGGGTGGGGTCTTCGATCACTAGATCCTATTCGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATCGATAGAGCCAATGTAAGTCAGAATGGAAATGAAGAAGGCATCGATGAGTATGTTTTTGATACAAGCCGTATTTTCGAACCATTCAAGTGGAATTATGAACCTAACATACTGGAAGAAGTGAGTTCAAAATGCTCTAGTGAAGATTATGATATACCGTCTCCTCTAATTATAAGTGCTAGGAATGTTGGAAATGTGGCTAGATTCATGAACCATAGTTGCGCCCCAAATGTTTTCTGGCAGCCAGTCTTATATGAAGAAAATAATCAATCCTTTCTTCACATTGCATTTTTTGCCCTTAGACACATTTCTCCACTGACAGAGCTAACATATGATTACGGTATTGCCCGTTCTGGTCATGCTGAGGGTAGCAGCACACCCAAAGGGAGAAATAAATGCTTGTGTGGATCATCAAAATGTCGTGGTTCTTTTTGTTGA 2250 0.4129 MNNLKKREIYLLFSHSILTIQIIVYLLTNLLQLQQLSDKHSHEIKKRSGFIMEEGLCPSSVFSSGSVDKSRIIEVKPLRSLAPLIPKSAQGSASGFSPFLPIGEPRETQAPPVPNAAPIRSFKNPTVEDETLNRAANGHIPSPPQHIPSAPHHIPNPTPLRSYKSPLVDEETPYGANSDTSSSVDGGLNGHGNSHDQKRAALQSQSRKSSQKKIRKIQEQSDNDGGRESVNSVLMTFDSIRRRLCQLEDANQLDTQNAIKRADLRANNAMTFKGIRTNSRKRVGVAPGVEIGDIFFFRIELCLVGLHGQSMSGIDYVNIKCEDKDLPVALSIVSSGVYDDDAEDNDILIYSGQGEHFNKKDKHIVDQKLQRGNLALDRSSQQHNEIRVIRGLRDVGNKSVKIYVYDGLYKIQDSWTEKGQSGGGIFKYKFVRLPGQPSAFANWKMVQKWKAGLLSRSGLILADLSTGVESIPVSLINDVDNEKGPAFFTYLCSLRHSKPYGLMQPSHGCSCSKACTPGCPNCSCIQRNGGDFPYIANGILVSRKQMIYECGPMCQCLPNCKNRVSQSGLKLHMEVFRTKDRGWGLRSLDPIRAGTFICEYAGEVIDRANVSQNGNEEGIDEYVFDTSRIFEPFKWNYEPNILEEVSSKCSSEDYDIPSPLIISARNVGNVARFMNHSCAPNVFWQPVLYEENNQSFLHIAFFALRHISPLTELTYDYGIARSGHAEGSSTPKGRNKCLCGSSKCRGSFC 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0634 749 Gene3D - 266 454 IPR036987 -
Lal9g0634 749 Pfam SET domain 582 718 IPR001214 GO:0005515
Lal9g0634 749 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 65 748 - -
Lal9g0634 749 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 65 748 - -
Lal9g0634 749 SMART G9a_1 279 436 IPR003105 -
Lal9g0634 749 MobiDBLite consensus disorder prediction 134 230 - -
Lal9g0634 749 SMART preset_2 461 555 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal9g0634 749 SMART set_7 571 724 IPR001214 GO:0005515
Lal9g0634 749 SUPERFAMILY PUA domain-like 268 454 IPR015947 -
Lal9g0634 749 SUPERFAMILY SET domain 470 746 IPR046341 -
Lal9g0634 749 ProSiteProfiles Post-SET domain profile. 733 749 IPR003616 -
Lal9g0634 749 ProSiteProfiles Pre-SET domain profile. 507 568 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal9g0634 749 Pfam SAD/SRA domain 283 436 IPR003105 -
Lal9g0634 749 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 18 749 IPR025794 GO:0016571
Lal9g0634 749 MobiDBLite consensus disorder prediction 103 122 - -
Lal9g0634 749 Pfam Pre-SET motif 465 563 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal9g0634 749 ProSiteProfiles YDG domain profile. 284 432 IPR003105 -
Lal9g0634 749 Gene3D SET domain 455 748 IPR046341 -
Lal9g0634 749 MobiDBLite consensus disorder prediction 174 208 - -
Lal9g0634 749 ProSiteProfiles SET domain profile. 571 718 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0634 Lal-Chr9 4320103 4324960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0634 67 748 Su(var)3-9 homologs AT5G04940 48.837 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal9g0634 SAD_SRA 9.8e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0634 K24405 - gmx:100800651 933.324